Version 5.4
Mus musculus Protein: Col20a1
Summary
InnateDB Protein IDBP-263644.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Col20a1
Protein Name collagen, type XX, alpha 1
Synonyms 1700051I12Rik;
Species Mus musculus
Ensembl Protein ENSMUSP00000104484
InnateDB Gene IDBG-213939 (Col20a1)
Protein Structure
UniProt Annotation
Function Probable collagen protein.
Subcellular Localization Secreted, extracellular space {ECO:0000305}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0005515 protein binding
Biological Process
GO:0008150 biological_process
Cellular Component
GO:0005575 cellular_component
GO:0005581 collagen trimer
GO:0005615 extracellular space
Protein Structure and Domains
PDB ID MGI:1920618
InterPro IPR001791 Laminin G domain
IPR002035 von Willebrand factor, type A
IPR003961 Fibronectin, type III
IPR008160 Collagen triple helix repeat
IPR008985 Concanavalin A-like lectin/glucanases superfamily
PFAM PF00054
PF02210
PF00092
PF00041
PF01108
PF01391
PRINTS
PIRSF
SMART SM00210
SM00282
SM00327
SM00060
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q923P0
PhosphoSite PhosphoSite-
TrEMBL
UniProt Splice Variant
Entrez Gene 73368
UniGene Mm.345095
RefSeq NP_082794
MGI ID
MGI Symbol Col20a1
OMIM
CCDS CCDS50844
HPRD
IMGT
EMBL AK006759 AL450341 BC016112 BC030415 BX649560
GenPept AAH16112 AAH30415 BAB24730 CAM23230 CAX15852

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca