Version 5.4
Mus musculus Protein: Rpl38
Summary
InnateDB Protein IDBP-268444.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rpl38
Protein Name ribosomal protein L38
Synonyms 0610025G13Rik; Rbt; Ts; Tss;
Species Mus musculus
Ensembl Protein ENSMUSP00000102211
InnateDB Gene IDBG-214099 (Rpl38)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 11 experimentally validated interaction(s) in this database.
They are also associated with 55 interaction(s) predicted by orthology.
Experimentally validated
Total 11 [view]
Protein-Protein 11 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 55 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0001501 skeletal system development
GO:0001503 ossification
GO:0006412 translation
GO:0006417 regulation of translation
GO:0007605 sensory perception of sound
GO:0034463 90S preribosome assembly
GO:0042474 middle ear morphogenesis
GO:0048318 axial mesoderm development
Cellular Component
GO:0005622 intracellular
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:0033291 eukaryotic 80S initiation complex
Protein Structure and Domains
PDB ID MGI:1914921
InterPro IPR002675 Ribosomal protein L38e
PFAM PF01781
PRINTS
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q9JJI8
PhosphoSite PhosphoSite-Q9JJI8
TrEMBL Q52KP0
UniProt Splice Variant
Entrez Gene 67671
UniGene Mm.414157
RefSeq NP_001041522
MGI ID
MGI Symbol Rpl38
OMIM
CCDS CCDS36365
HPRD
IMGT
EMBL AB037665 AK002659 AK010277 AK010518 AK012391 AK151517 BC034339 BC055346 BC094258 BC094644 CH466558 CH466572 CH466615
GenPept AAH34339 AAH55346 AAH94258 AAH94644 BAB03500 BAB22266 BAB26814 BAB27000 BAB28208 BAE30466 EDL10619 EDL13265 EDL34437 EDL34438 EDL34439

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca