Version 5.4
Mus musculus Protein: Col10a1
Summary
InnateDB Protein IDBP-270729.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Col10a1
Protein Name collagen, type X, alpha 1
Synonyms Col10; Col10a-1;
Species Mus musculus
Ensembl Protein ENSMUSP00000101150
InnateDB Gene IDBG-143867 (Col10a1)
Protein Structure
UniProt Annotation
Function Type X collagen is a product of hypertrophic chondrocytes and has been localized to presumptive mineralization zones of hyaline cartilage.
Subcellular Localization Secreted, extracellular space, extracellular matrix {ECO:0000250}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0001958 endochondral ossification
GO:0051216 cartilage development
Cellular Component
GO:0005578 proteinaceous extracellular matrix
GO:0005581 collagen trimer
GO:0005938 cell cortex
Protein Structure and Domains
PDB ID MGI:88445
InterPro IPR001073 Complement C1q protein
IPR008160 Collagen triple helix repeat
IPR008983 Tumour necrosis factor-like domain
PFAM PF00386
PF01391
PRINTS PR00007
PIRSF
SMART SM00110
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q05306
PhosphoSite PhosphoSite-Q05306
TrEMBL
UniProt Splice Variant
Entrez Gene 12813
UniGene Mm.443177
RefSeq NP_034055
MGI ID
MGI Symbol Col10a1
OMIM
CCDS CCDS23780
HPRD
IMGT
EMBL X63013 X65121 X67348 Z21610
GenPept CAA44741 CAA46237 CAA47763 CAA79736

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca