Version 5.4
Homo sapiens Protein: TRIM6
Summary
InnateDB Protein IDBP-27327.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol TRIM6
Protein Name tripartite motif containing 6
Synonyms
Species Homo sapiens
Ensembl Protein ENSP00000278302
InnateDB Gene IDBG-27325 (TRIM6)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 10 experimentally validated interaction(s) in this database.
Experimentally validated
Total 10 [view]
Protein-Protein 9 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0046872 metal ion binding
Biological Process
GO:0045087 innate immune response (InnateDB)
GO:0070206 protein trimerization
Cellular Component
GO:0005622 intracellular
GO:0005737 cytoplasm
Protein Structure and Domains
PDB ID
InterPro IPR000315 Zinc finger, B-box
IPR001841 Zinc finger, RING-type
IPR001870 B30.2/SPRY domain
IPR003877 SPRY domain
IPR003879 Butyrophylin-like
IPR006574 SPRY-associated
IPR008985 Concanavalin A-like lectin/glucanases superfamily
IPR018957 Zinc finger, C3HC4 RING-type
PFAM PF00643
PF13639
PF14634
PF00622
PF13765
PF00097
PRINTS PR01407
PIRSF
SMART SM00336
SM00184
SM00449
SM00589
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q9C030
PhosphoSite PhosphoSite-Q9C030
TrEMBL C9JNQ0
UniProt Splice Variant
Entrez Gene 117854
UniGene
RefSeq NP_477514
HUGO HGNC:16277
OMIM 607564
CCDS CCDS31390
HPRD 12123
IMGT
EMBL AB039903 AC015691 AF220030 AK027664 AK290172 AK293295 AK298301 AK316178 AK316289 BC047564 CH471064
GenPept AAG53484 AAH47564 BAB17050 BAB55276 BAF82861 BAG56816 BAG60556 BAH14549 BAH14660 EAW68783 EAW68785

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca