Homo sapiens Protein: PAX3
Summary
InnateDB Protein IDBP-292986.5
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PAX3
Protein Name paired box 3
Synonyms CDHS; HUP2; WS1; WS3;
Species Homo sapiens
Ensembl Protein ENSP00000386817
InnateDB Gene IDBG-82144 (PAX3)
Protein Structure
UniProt Annotation
Function Transcription factor that may regulate cell proliferation, migration and apoptosis. Involved in neural development and myogenesis. {ECO:0000269PubMed:16951170}.
Subcellular Localization Nucleus.
Disease Associations Waardenburg syndrome 1 (WS1) [MIM:193500]: WS1 is an autosomal dominant disorder characterized by non-progressive sensorineural deafness, pigmentary disturbances such as frontal white blaze of hair, heterochromia of irides, white eyelashes, leukoderma, and wide bridge of nose owing to lateral displacement of the inner canthus of each eye (dystopia canthorum). WS1 shows variable clinical expression and some affected individuals do not manifest hearing impairment or iris pigmentation disturbances. Dystopia canthorum is the most consistent sign and is found in 98% of the patients. {ECO:0000269PubMed:10779847, ECO:0000269PubMed:12949970, ECO:0000269PubMed:1303193, ECO:0000269PubMed:1347148, ECO:0000269PubMed:1347149, ECO:0000269PubMed:7825605, ECO:0000269PubMed:7833953, ECO:0000269PubMed:7981674, ECO:0000269PubMed:8447316, ECO:0000269PubMed:8490648, ECO:0000269PubMed:8533800, ECO:0000269PubMed:8589691, ECO:0000269PubMed:8845842, ECO:0000269PubMed:9067759, ECO:0000269PubMed:9452070, ECO:0000269PubMed:9541113, ECO:0000269Ref.34}. Note=The disease is caused by mutations affecting the gene represented in this entry.Waardenburg syndrome 3 (WS3) [MIM:148820]: WS3 is an autosomal dominant disorder characterized by sensorineural deafness, pigmentary disturbances, dystopia canthorum and limb anomalies such as hypoplasia of the musculoskeletal system, flexion contractures, fusion of the carpal bones, syndactylies. {ECO:0000269PubMed:12949970, ECO:0000269PubMed:7726174, ECO:0000269Ref.35}. Note=The disease is caused by mutations affecting the gene represented in this entry.Craniofacial-deafness-hand syndrome (CDHS) [MIM:122880]: Thought to be an autosomal dominant disease which comprises absence or hypoplasia of the nasal bones, hypoplastic maxilla, small and short nose with thin nares, limited movement of the wrist, short palpebral fissures, ulnar deviation of the fingers, hypertelorism and profound sensory-neural deafness. {ECO:0000269PubMed:8664898}. Note=The disease is caused by mutations affecting the gene represented in this entry.Rhabdomyosarcoma 2 (RMS2) [MIM:268220]: A form of rhabdomyosarcoma, a highly malignant tumor of striated muscle derived from primitive mesenchymal cells and exhibiting differentiation along rhabdomyoblastic lines. Rhabdomyosarcoma is one of the most frequently occurring soft tissue sarcomas and the most common in children. It occurs in four forms: alveolar, pleomorphic, embryonal and botryoidal rhabdomyosarcomas. Note=The gene represented in this entry is involved in disease pathogenesis. A chromosomal aberration involving PAX3 is found in rhabdomyosarcoma. Translocation (2;13)(q35;q14) with FOXO1. The resulting protein is a transcriptional activator.Note=A chromosomal aberration involving PAX3 is a cause of rhabdomyosarcoma. Translocation t(2;2)(q35;p23) with NCOA1 generates the NCOA1-PAX3 oncogene consisting of the N-terminus part of PAX3 and the C-terminus part of NCOA1. The fusion protein acts as a transcriptional activator. Rhabdomyosarcoma is the most common soft tissue carcinoma in childhood, representing 5-8% of all malignancies in children.
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 29 experimentally validated interaction(s) in this database.
They are also associated with 18 interaction(s) predicted by orthology.
Experimentally validated
Total 29 [view]
Protein-Protein 24 [view]
Protein-DNA 4 [view]
Protein-RNA 0
DNA-DNA 1 [view]
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 18 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0005515 protein binding
GO:0043565 sequence-specific DNA binding
Biological Process
GO:0006355 regulation of transcription, DNA-templated
GO:0006366 transcription from RNA polymerase II promoter
GO:0006915 apoptotic process
GO:0007605 sensory perception of sound
GO:0009887 organ morphogenesis
GO:0045893 positive regulation of transcription, DNA-templated
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
Cellular Component
GO:0005634 nucleus
Protein Structure and Domains
PDB ID
InterPro IPR001523 Paired domain
IPR009057 Homeodomain-like
PFAM PF00292
PRINTS PR00027
PIRSF
SMART SM00351
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt P23760
PhosphoSite PhosphoSite-P23760
TrEMBL
UniProt Splice Variant
Entrez Gene 5077
UniGene Hs.42146
RefSeq NP_000429
HUGO HGNC:8617
OMIM 606597
CCDS CCDS46523
HPRD 09421
IMGT
EMBL AC010980 AC012591 AK291278 AY251279 AY251280 AY633656 BC063547 BC101299 BC101300 BC101301 BC101302 BC114363 CH471063 L10614 S69369 S69370 S83614 U12258 U12259 U12260 U12262 U12263 X15043 X15252 X15253 Z29972 Z29973 Z29974
GenPept AAA80573 AAA80574 AAA91849 AAB21476 AAB30167 AAB30168 AAH63547 AAI01300 AAI01301 AAI01302 AAI01303 AAI14364 AAP13872 AAP13873 AAT47737 AAY14900 BAF83967 CAA33145 EAW70789 EAW70791 EAW70794 EAW70796