Version 5.4
Homo sapiens Protein: ZSCAN21
Summary
InnateDB Protein IDBP-30316.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol ZSCAN21
Protein Name zinc finger and SCAN domain containing 21
Synonyms NY-REN-21; Zipro1; ZNF38;
Species Homo sapiens
Ensembl Protein ENSP00000292450
InnateDB Gene IDBG-30312 (ZSCAN21)
Protein Structure
UniProt Annotation
Function Strong transcriptional activator. {ECO:0000250}.
Subcellular Localization Nucleus {ECO:0000255PROSITE- ProRule:PRU00187}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 5 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0005515 protein binding
GO:0046872 metal ion binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0045893 positive regulation of transcription, DNA-templated
Cellular Component
GO:0005634 nucleus
Protein Structure and Domains
PDB ID
InterPro IPR003309 Transcription regulator SCAN
IPR007087 Zinc finger, C2H2
IPR008916 Retrovirus capsid, C-terminal
IPR015880 Zinc finger, C2H2-like
PFAM PF02023
PF00096
PRINTS
PIRSF
SMART SM00431
SM00355
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q9Y5A6
PhosphoSite PhosphoSite-Q9Y5A6
TrEMBL Q8N506
UniProt Splice Variant
Entrez Gene 7589
UniGene
RefSeq NP_666019
HUGO HGNC:13104
OMIM 601261
CCDS CCDS5681
HPRD 03162
IMGT
EMBL AC093619 AF155100 AL136865 BC033129 BC047309 CH236956 CH471091
GenPept AAD42866 AAH33129 AAH47309 CAB66799 EAL23860 EAW76609 EAW76610

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca