Version 5.4
Homo sapiens Protein: SAFB
Summary
InnateDB Protein IDBP-366362.4
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SAFB
Protein Name scaffold attachment factor B
Synonyms HAP; HET; SAF-B1; SAFB1;
Species Homo sapiens
Ensembl Protein ENSP00000415895
InnateDB Gene IDBG-20250 (SAFB)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 76 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 76 [view]
Protein-Protein 74 [view]
Protein-DNA 2 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003690 double-stranded DNA binding
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006325 chromatin organization
GO:0006351 transcription, DNA-templated
Cellular Component
GO:0005634 nucleus
Protein Structure and Domains
PDB ID
InterPro IPR000504 RNA recognition motif domain
IPR003034 SAP domain
PFAM PF00076
PF02037
PRINTS
PIRSF
SMART SM00360
SM00513
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q15424
PhosphoSite PhosphoSite-Q15424
TrEMBL Q68DW3
UniProt Splice Variant
Entrez Gene 6294
UniGene Hs.728802
RefSeq NP_001188269
HUGO HGNC:10520
OMIM 602895
CCDS CCDS56077
HPRD 04205
IMGT
EMBL AB208780 AC004611 AC011499 AC134303 AK298707 BC126219 BC143937 BC143939 CR749251 L43631 U72355
GenPept AAC00056 AAC14667 AAC18697 AAI26220 AAI43938 AAI43940 BAD92017 BAH12852 CAH18107

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca