Version 5.4
Mus musculus Protein: Gatad1
Summary
InnateDB Protein IDBP-401596.4
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Gatad1
Protein Name GATA zinc finger domain containing 1
Synonyms 2310031E19Rik; 2810047M21Rik; 8430439A17Rik; 9130430G15Rik; B330017N08Rik; ENSMUSG00000073241; Odag;
Species Mus musculus
Ensembl Protein ENSMUSP00000113271
InnateDB Gene IDBG-131741 (Gatad1)
Protein Structure
UniProt Annotation
Function Component of some chromatin complex recruited to chromatin sites methylated 'Lys-4' of histone H3 (H3K4me). {ECO:0000250}.
Subcellular Localization Nucleus {ECO:0000250}.
Disease Associations
Tissue Specificity Expressed in the eye (lens, ciliary body, retina, sclera and conjunctiva) at postnatal day 2 and 10. Not detected anywhere at postnatal day 14. {ECO:0000269PubMed:12062807}.
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0008270 zinc ion binding
GO:0043565 sequence-specific DNA binding
Biological Process
GO:0006355 regulation of transcription, DNA-templated
Cellular Component
GO:0005634 nucleus
Protein Structure and Domains
PDB ID MGI:1914460
InterPro IPR000679 Zinc finger, GATA-type
PFAM PF00320
PRINTS PR00619
PIRSF
SMART SM00401
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q920S3
PhosphoSite PhosphoSite-Q920S3
TrEMBL
UniProt Splice Variant
Entrez Gene 67210
UniGene Mm.441974
RefSeq
MGI ID
MGI Symbol Gatad1
OMIM
CCDS
HPRD
IMGT
EMBL AB047921 AK012921 BC019449
GenPept AAH19449 BAB28550 BAB69047

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca