InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Snrpa1

Summary

InnateDB Protein

IDBP-534453.3

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Snrpa1

Protein Name

small nuclear ribonucleoprotein polypeptide A'

Synonyms

1500015N06Rik;

Species

Mus musculus

Ensembl Protein

ENSMUSP00000117947

InnateDB Gene

IDBG-191583 (Snrpa1)

Protein Structure

UniProt Annotation

Function

This protein is associated with sn-RNP U2. It helps the A' protein to bind stem loop IV of U2 snRNA (By similarity). {ECO:0000250}.

Subcellular Localization

Nucleus {ECO:0000250}.

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 7 experimentally validated interaction(s) in this database.
They are also associated with 85 interaction(s) predicted by orthology.

Experimentally validated
Total	7 [view]
Protein-Protein	7 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	85 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0003723	RNA binding
GO:0005515	protein binding
GO:0044822	poly(A) RNA binding

Biological Process

GO:0006397	mRNA processing
GO:0008380	RNA splicing

Cellular Component

GO:0005634	nucleus
GO:0005681	spliceosomal complex
GO:0071013	catalytic step 2 spliceosome

Protein Structure and Domains

PDB ID

MGI:1916231

InterPro

IPR003603 U2A\'/phosphoprotein 32 family A, C-terminal

PFAM

PRINTS

PIRSF

SMART

SM00446

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

P57784

PhosphoSite

PhosphoSite-P57784

TrEMBL

UniProt Splice Variant

Entrez Gene

68981

UniGene

Mm.477293

RefSeq

NP_067311

MGI ID

MGI Symbol

Snrpa1

OMIM

CCDS

CCDS21342

HPRD

IMGT

EMBL

AF230356 AK088438 AK151800 AK152546 AK153502 BC013777 BC029642

GenPept

AAF35392 AAH13777 AAH29642 BAC40353 BAE30700 BAE31301 BAE32048