Version 5.4
Mus musculus Protein: Rfx5
Summary
InnateDB Protein IDBP-537637.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rfx5
Protein Name regulatory factor X, 5 (influences HLA class II expression)
Synonyms
Species Mus musculus
Ensembl Protein ENSMUSP00000118586
InnateDB Gene IDBG-171037 (Rfx5)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 18 interaction(s) predicted by orthology.
Predicted by orthology
Total 18 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
Biological Process
GO:0000122 negative regulation of transcription from RNA polymerase II promoter
GO:0006355 regulation of transcription, DNA-templated
Cellular Component
Protein Structure and Domains
PDB ID MGI:1858421
InterPro IPR003150 DNA-binding RFX-type winged-helix domain
IPR004968 DNA primase/nucleoside triphosphatase, C-terminal
PFAM PF02257
PF03288
PRINTS
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL K4DI79
UniProt Splice Variant
Entrez Gene 53970
UniGene Mm.24308
RefSeq
MGI ID
MGI Symbol Rfx5
OMIM
CCDS
HPRD
IMGT
EMBL AC087062
GenPept

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca