InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Lsmd1

Summary

InnateDB Protein

IDBP-539852.3

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Lsmd1

Protein Name

LSM domain containing 1

Synonyms

1500034E06Rik; Lsmd1;

Species

Mus musculus

Ensembl Protein

ENSMUSP00000123155

InnateDB Gene

IDBG-190657 (Lsmd1)

Protein Structure

UniProt Annotation

Function

Auxillary component of the N-terminal acetyltransferase C (NatC) complex which catalyzes acetylation of N-terminal methionine residues. {ECO:0000250}.

Subcellular Localization

Cytoplasm {ECO:0000250}. Nucleus {ECO:0000250}.

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.

Experimentally validated
Total	2 [view]
Protein-Protein	2 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	2 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0003674	molecular_function

Biological Process

GO:0043066

negative regulation of apoptotic process

Cellular Component

GO:0005634	nucleus
GO:0005737	cytoplasm
GO:0005844	polysome
GO:0031417	NatC complex

Protein Structure and Domains

PDB ID

MGI:1925554

InterPro

IPR001163 Ribonucleoprotein LSM domain
IPR006649 Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 Like-Sm (LSM) domain

PFAM

PF01423

PRINTS

PIRSF

SMART

SM00651

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

Q9D2U5

PhosphoSite

PhosphoSite-Q9D2U5

TrEMBL

UniProt Splice Variant

Entrez Gene

78304

UniGene

RefSeq

NP_084359

MGI ID

MGI Symbol

Naa38

OMIM

CCDS

CCDS24893

HPRD

IMGT

EMBL

AK018782 AL596125 BC048499 BC062267

GenPept

AAH48499 AAH62267 BAB31406 CAI35994