InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Zcchc17

Summary

InnateDB Protein

IDBP-542760.4

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Zcchc17

Protein Name

zinc finger, CCHC domain containing 17

Synonyms

Species

Mus musculus

Ensembl Protein

ENSMUSP00000120807

InnateDB Gene

IDBG-192683 (Zcchc17)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Nucleus, nucleolus {ECO:0000269PubMed:12202495, ECO:0000269PubMed:12893261}.

Disease Associations

Tissue Specificity

Expressed in liver, brain, heart, kidney testis, stomach, small intestine, skin, thymus, uterus, placenta, spleen, lung and skeletal muscle. {ECO:0000269PubMed:12202495, ECO:0000269PubMed:12893261}.

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 6 interaction(s) predicted by orthology.

Experimentally validated
Total	1 [view]
Protein-Protein	0
Protein-DNA	0
Protein-RNA	1 [view]
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	6 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0003676	nucleic acid binding
GO:0003723	RNA binding
GO:0008270	zinc ion binding

Biological Process

Cellular Component

GO:0005730	nucleolus
GO:0022625	cytosolic large ribosomal subunit

Protein Structure and Domains

PDB ID

MGI:1919955

InterPro

IPR001878 Zinc finger, CCHC-type
IPR003029 Ribosomal protein S1, RNA-binding domain
IPR012340 Nucleic acid-binding, OB-fold
IPR022967 RNA-binding domain, S1

PFAM

PF00098
PF00575

PRINTS

PIRSF

SMART

SM00343
SM00316

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

Q9ESX4