Version 5.4
Mus musculus Protein: Chd1
Summary
InnateDB Protein IDBP-620802.2
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Chd1
Protein Name chromodomain helicase DNA binding protein 1
Synonyms 2010110K24Rik; 2410085M17Rik; 4930525N21Rik; AI851787; AW555109;
Species Mus musculus
Ensembl Protein ENSMUSP00000134091
InnateDB Gene IDBG-140118 (Chd1)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
They are also associated with 17 interaction(s) predicted by orthology.
Experimentally validated
Total 5 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 17 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0004386 helicase activity
GO:0005524 ATP binding
GO:0016787 hydrolase activity
Biological Process
GO:0006338 chromatin remodeling
GO:0008152 metabolic process
Cellular Component
GO:0005634 nucleus
Protein Structure and Domains
PDB ID MGI:88393
InterPro IPR000330 SNF2-related
IPR000953 Chromo domain/shadow
IPR001650 Helicase, C-terminal
IPR006935 Helicase/UvrB domain
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
IPR016197 Chromo domain-like
IPR021006 Histone deacetylase complex, subunit 2/3
IPR023780 Chromo domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
PFAM PF00176
PF00271
PF04851
PF11496
PF00385
PRINTS
PIRSF
SMART SM00298
SM00490
SM00487
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL Q9CRD9
UniProt Splice Variant
Entrez Gene 67045
UniGene Mm.8137
RefSeq
MGI ID
MGI Symbol Chd1
OMIM
CCDS
HPRD
IMGT
EMBL AC102745 AK021188 AK049686 CT033750
GenPept BAB32322 BAC33872

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca