Version 5.4
Mus musculus Protein: Matr3
Summary
InnateDB Protein IDBP-621920.2
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Matr3
Protein Name matrin 3
Synonyms 1110061A14Rik; 2810017I02Rik; AI841759; AW555618; D030046F20Rik; mKIAA0723;
Species Mus musculus
Ensembl Protein ENSMUSP00000125761
InnateDB Gene IDBG-136841 (Matr3)
Protein Structure
UniProt Annotation
Function May play a role in transcription or may interact with other nuclear matrix proteins to form the internal fibrogranular network. In association with the SFPQ-NONO heteromer may play a role in nuclear retention of defective RNAs (By similarity). {ECO:0000250}.
Subcellular Localization Nucleus matrix {ECO:0000255PROSITE- ProRule:PRU00130}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 23 experimentally validated interaction(s) in this database.
They are also associated with 57 interaction(s) predicted by orthology.
Experimentally validated
Total 23 [view]
Protein-Protein 22 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 57 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0008270 zinc ion binding
Biological Process
Cellular Component
GO:0005634 nucleus
GO:0016363 nuclear matrix
Protein Structure and Domains
PDB ID MGI:1298379
InterPro IPR000504 RNA recognition motif domain
IPR000690 Zinc finger, C2H2-type matrin
IPR003604 Zinc finger, U1-type
PFAM PF00076
PRINTS
PIRSF
SMART SM00360
SM00451
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q8K310
PhosphoSite PhosphoSite-Q8K310
TrEMBL Q6ZQ61
UniProt Splice Variant
Entrez Gene 17184
UniGene Mm.471883
RefSeq NP_034901
MGI ID 1X4F
MGI Symbol Matr3
OMIM
CCDS CCDS29142
HPRD
IMGT
EMBL AK087939 AK129199 AK135937 AK148384 AK157744 BC029070 BC090833 CH466557
GenPept AAH29070 AAH90833 BAC40050 BAC98009 BAE22731 BAE28522 BAE34177 EDK97131

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca