Version 5.4
Mus musculus Protein: Lrrc47
Summary
InnateDB Protein IDBP-625090.2
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Lrrc47
Protein Name leucine rich repeat containing 47
Synonyms 2900010D03Rik; AA960559; mKIAA1185;
Species Mus musculus
Ensembl Protein ENSMUSP00000133124
InnateDB Gene IDBG-206847 (Lrrc47)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 12 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 12 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003723 RNA binding
GO:0004826 phenylalanine-tRNA ligase activity
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0008150 biological_process
GO:0008152 metabolic process
Cellular Component
GO:0005575 cellular_component
Protein Structure and Domains
PDB ID MGI:1920196
InterPro IPR001611 Leucine-rich repeat
IPR003591 Leucine-rich repeat, typical subtype
IPR005146 B3/B4 tRNA-binding domain
PFAM PF00560
PF13504
PF13855
PF03483
PRINTS
PIRSF
SMART SM00369
SM00873
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL E9PV22
UniProt Splice Variant
Entrez Gene 72946
UniGene Mm.474341
RefSeq
MGI ID
MGI Symbol Lrrc47
OMIM
CCDS
HPRD
IMGT
EMBL AK013512 AK129306 AK154897 AL806525 BC094573 BC138462 BC138463
GenPept AAH94573 AAI38463 AAI38464 BAB28889 BAC98116 BAE32909

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca