Version 5.4
Homo sapiens Protein: SSX5
Summary
InnateDB Protein IDBP-62545.5
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SSX5
Protein Name synovial sarcoma, X breakpoint 5
Synonyms
Species Homo sapiens
Ensembl Protein ENSP00000366122
InnateDB Gene IDBG-62539 (SSX5)
Protein Structure
UniProt Annotation
Function Could act as a modulator of transcription.
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
Cellular Component
GO:0005622 intracellular
GO:0005634 nucleus
Protein Structure and Domains
PDB ID
InterPro IPR001909 Krueppel-associated box
IPR003655 Krueppel-associated box-related
IPR019041 SSXRD motif
PFAM PF01352
PF09514
PRINTS
PIRSF
SMART SM00349
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt O60225
PhosphoSite PhosphoSite-O60225
TrEMBL
UniProt Splice Variant
Entrez Gene 6758
UniGene Hs.166198
RefSeq
HUGO HGNC:11339
OMIM 300542
CCDS CCDS14289
HPRD 02267
IMGT
EMBL AL356464 AL683817 BC016640 U90842
GenPept AAC05821 AAH16640 CAI40523 CAI40524 CAI41133 CAI41134

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca