InnateDB: Systems Biology of the Innate Immune Response

Bos taurus Protein: BT.103096

Summary

InnateDB Protein

IDBP-680929.2

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

BT.103096

Protein Name

SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5

Synonyms

Species

Bos taurus

Ensembl Protein

ENSBTAP00000004408

InnateDB Gene

IDBG-629522 (BT.103096)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 85 interaction(s) predicted by orthology.

Predicted by orthology
Total	85 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0003676	nucleic acid binding
GO:0003677	DNA binding
GO:0003682	chromatin binding
GO:0004386	helicase activity
GO:0005515	protein binding
GO:0005524	ATP binding
GO:0016787	hydrolase activity
GO:0016817	hydrolase activity, acting on acid anhydrides
GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0016887	ATPase activity
GO:0031491	nucleosome binding
GO:0042393	histone binding

Biological Process

GO:0000183	chromatin silencing at rDNA
GO:0006200	ATP catabolic process
GO:0006302	double-strand break repair
GO:0006333	chromatin assembly or disassembly
GO:0006334	nucleosome assembly
GO:0006338	chromatin remodeling
GO:0006352	DNA-templated transcription, initiation
GO:0016584	nucleosome positioning
GO:0043044	ATP-dependent chromatin remodeling

Cellular Component

GO:0000793	condensed chromosome
GO:0005634	nucleus
GO:0005677	chromatin silencing complex
GO:0016589	NURF complex
GO:0031010	ISWI-type complex
GO:0031213	RSF complex
GO:0043596	nuclear replication fork

Protein Structure and Domains

PDB ID

InterPro

IPR000330 SNF2-related
IPR001005 SANT/Myb domain
IPR001650 Helicase, C-terminal
IPR006935 Helicase/UvrB domain
IPR009057 Homeodomain-like
IPR011545 DEAD/DEAH box helicase domain
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
IPR015194 ISWI HAND domain
IPR015195 SLIDE domain
IPR021006 Histone deacetylase complex, subunit 2/3
IPR027417 P-loop containing nucleoside triphosphate hydrolase

PFAM