Version 5.4
Bos taurus Protein: SMG6
Summary
InnateDB Protein IDBP-684651.2
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SMG6
Protein Name smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)
Synonyms
Species Bos taurus
Ensembl Protein ENSBTAP00000000333
InnateDB Gene IDBG-632968 (SMG6)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0004521 endoribonuclease activity
GO:0005515 protein binding
GO:0042162 telomeric DNA binding
Biological Process
GO:0000723 telomere maintenance
GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0035145 exon-exon junction complex
Protein Structure and Domains
PDB ID
InterPro IPR002716 PIN domain
IPR019458 Telomerase activating protein Est1
IPR029060 PIN domain-like
PFAM PF01850
PF10130
PF13470
PF13638
PF10374
PRINTS
PIRSF
SMART SM00670
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL E1BFK4
UniProt Splice Variant
Entrez Gene 516411
UniGene Bt.4143
RefSeq NP_001192756
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02048669 DAAA02048670 DAAA02048671
GenPept

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca