InnateDB: Systems Biology of the Innate Immune Response

Bos taurus Protein: SYCP1

Summary

InnateDB Protein

IDBP-686464.2

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

SYCP1

Protein Name

synaptonemal complex protein 1

Synonyms

Species

Bos taurus

Ensembl Protein

ENSBTAP00000030740

InnateDB Gene

IDBG-634608 (SYCP1)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.

Predicted by orthology
Total	3 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0005515	protein binding

Biological Process

GO:0000711	meiotic DNA repair synthesis
GO:0007130	synaptonemal complex assembly
GO:0007283	spermatogenesis
GO:0032880	regulation of protein localization
GO:0035092	sperm chromatin condensation
GO:0051026	chiasma assembly
GO:0051878	lateral element assembly

Cellular Component

GO:0000795	synaptonemal complex
GO:0000801	central element
GO:0000802	transverse filament
GO:0001673	male germ cell nucleus
GO:0005694	chromosome

Protein Structure and Domains

PDB ID

InterPro

IPR008827 Synaptonemal complex 1

PFAM

PF05483

PRINTS

PIRSF

SMART

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

PhosphoSite

TrEMBL

UniProt Splice Variant

Entrez Gene

UniGene

RefSeq

HUGO

OMIM

CCDS

HPRD

IMGT

EMBL

DAAA02007449 DAAA02007450 DAAA02007451 DAAA02007452 DAAA02007453 DAAA02007454 DAAA02007455 DAAA02007456

GenPept

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1)

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca