Version 5.4
Bos taurus Protein: TRIM54
Summary
InnateDB Protein IDBP-688689.2
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol TRIM54
Protein Name Tripartite motif-containing protein 54
Synonyms
Species Bos taurus
Ensembl Protein ENSBTAP00000024312
InnateDB Gene IDBG-636734 (TRIM54)
Protein Structure
UniProt Annotation
Function May bind and stabilize microtubules during myotubes formation. {ECO:0000250}.
Subcellular Localization Cytoplasm, cytoskeleton {ECO:0000250}. Cytoplasm, myofibril, sarcomere, Z line {ECO:0000250}. Note=Associates with microtubules. Localizes to the Z-lines in skeletal muscles (By similarity). {ECO:0000250}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 27 interaction(s) predicted by orthology.
Predicted by orthology
Total 27 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0008017 microtubule binding
GO:0008270 zinc ion binding
GO:0046872 metal ion binding
Biological Process
GO:0007026 negative regulation of microtubule depolymerization
GO:0007275 multicellular organismal development
GO:0030154 cell differentiation
GO:0046417 chorismate metabolic process
Cellular Component
GO:0005622 intracellular
GO:0005737 cytoplasm
GO:0005856 cytoskeleton
GO:0005874 microtubule
GO:0005875 microtubule associated complex
GO:0030018 Z disc
Protein Structure and Domains
PDB ID
InterPro IPR000315 Zinc finger, B-box
IPR001841 Zinc finger, RING-type
IPR018957 Zinc finger, C3HC4 RING-type
IPR020822 Chorismate mutase, type II
PFAM PF00643
PF13639
PF14634
PF00097
PF01817
PRINTS
PIRSF
SMART SM00336
SM00184
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q58D15
PhosphoSite PhosphoSite-
TrEMBL
UniProt Splice Variant
Entrez Gene 535320
UniGene Bt.9981
RefSeq NP_001017951
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL BC114171 BT021782
GenPept AAI14172 AAX46629

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca