InnateDB: Systems Biology of the Innate Immune Response

Bos taurus Protein: SSC5D

Summary

InnateDB Protein

IDBP-694191.2

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

SSC5D

Protein Name

scavenger receptor cysteine rich domain containing (5 domains)

Synonyms

Species

Bos taurus

Ensembl Protein

ENSBTAP00000041247

InnateDB Gene

IDBG-641786 (SSC5D)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.

Gene Ontology

Molecular Function

Accession	GO Term
GO:0001968	fibronectin binding
GO:0005044	scavenger receptor activity
GO:0005515	protein binding
GO:0043236	laminin binding
GO:0050840	extracellular matrix binding

Biological Process

GO:0006898	receptor-mediated endocytosis
GO:0006952	defense response
GO:0042494	detection of bacterial lipoprotein
GO:0050829	defense response to Gram-negative bacterium
GO:0050830	defense response to Gram-positive bacterium
GO:2000482	regulation of interleukin-8 secretion
GO:2000483	negative regulation of interleukin-8 secretion

Cellular Component

GO:0005615	extracellular space
GO:0005622	intracellular
GO:0016020	membrane
GO:0031012	extracellular matrix

Protein Structure and Domains

PDB ID

InterPro

IPR001190 SRCR domain
IPR017448 SRCR-like domain

PFAM

PF00530

PRINTS

PR00258

PIRSF

SMART

SM00202

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

PhosphoSite

PhosphoSite-

TrEMBL

F1MLU5

UniProt Splice Variant

Entrez Gene

UniGene

RefSeq

HUGO

HGNC:26641

OMIM

CCDS

HPRD

IMGT

EMBL

DAAA02047736 DAAA02047737 DAAA02047738 DAAA02047739

GenPept