InnateDB Protein
|
IDBP-70908.6
|
Last Modified
|
2014-10-13 [Report errors or provide feedback]
|
Gene Symbol
|
LCT
|
Protein Name
|
lactase
|
Synonyms
|
LAC; LPH; LPH1;
|
Species
|
Homo sapiens
|
Ensembl Protein
|
ENSP00000264162
|
InnateDB Gene
|
IDBG-70906 (LCT)
|
Protein Structure
|
|
Function |
LPH splits lactose in the small intestine.
|
Subcellular Localization |
Apical cell membrane; Single-pass type I membrane protein. Note=Brush border.
|
Disease Associations |
Congenital lactase deficiency (COLACD) [MIM:223000]: Autosomal recessive, rare and severe gastrointestinal disorder. It is characterized by watery diarrhea in infants fed with breast milk or other lactose-containing formulas. An almost total lack of LCT activity is found in jejunal biopsy material of patients with congenital lactase deficiency. Opposite to congenital lactase deficiency, also known as lactose intolerance, is the most common enzyme deficiency worldwide. It is caused by developmental down- regulation of lactase activity during childhood or early adulthood. The decline of lactase activity is a normal physiological phenomenon; however, the majority of Northern Europeans have the ability to maintain lactase activity and digest lactose throughout life (lactase persistence). The down-regulation of lactase activity operates at the transcriptional level and it is associated with a noncoding variation in the MCM6 gene, located in the upstream vicinity of LCT. {ECO:0000269PubMed:16400612}. Note=The disease is caused by mutations affecting the gene represented in this entry.
|
Tissue Specificity |
Intestine.
|
Comments |
|
Number of Interactions
|
This gene and/or its encoded proteins are associated with 4 experimentally validated interaction(s) in this database.
Experimentally validated |
Total |
4
[view]
|
Protein-Protein |
4
[view]
|
Protein-DNA |
0
|
Protein-RNA |
0
|
DNA-DNA |
0
|
RNA-RNA |
0
|
DNA-RNA |
0
|
|
|
|
Molecular Function |
|
Biological Process |
|
Cellular Component |
|
PDB ID |
|
InterPro |
IPR001360
Glycoside hydrolase, family 1
IPR017853
Glycoside hydrolase, superfamily
|
PFAM |
PF00232
|
PRINTS |
PR00131
|
PIRSF |
|
SMART |
|
TIGRFAMs |
|
Modification |
|
SwissProt |
P09848
|
PhosphoSite |
PhosphoSite-P09848
|
TrEMBL |
|
UniProt Splice Variant |
|
Entrez Gene |
3938
|
UniGene |
Hs.551506
|
RefSeq |
NP_002290
|
HUGO |
HGNC:6530
|
OMIM |
603202
|
CCDS |
CCDS2178
|
HPRD |
04437
|
IMGT |
|
EMBL |
AC011893
M61834
M61835
M61836
M61837
M61838
M61839
M61840
M61841
M61842
M61843
M61844
M61845
M61846
M61847
M61848
M61849
M61850
X07994
|
GenPept |
AAA59504
AAX88924
CAA30801
|
|
|