Homo sapiens Protein: LCT
Summary
InnateDB Protein IDBP-70908.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol LCT
Protein Name lactase
Synonyms LAC; LPH; LPH1;
Species Homo sapiens
Ensembl Protein ENSP00000264162
InnateDB Gene IDBG-70906 (LCT)
Protein Structure
UniProt Annotation
Function LPH splits lactose in the small intestine.
Subcellular Localization Apical cell membrane; Single-pass type I membrane protein. Note=Brush border.
Disease Associations Congenital lactase deficiency (COLACD) [MIM:223000]: Autosomal recessive, rare and severe gastrointestinal disorder. It is characterized by watery diarrhea in infants fed with breast milk or other lactose-containing formulas. An almost total lack of LCT activity is found in jejunal biopsy material of patients with congenital lactase deficiency. Opposite to congenital lactase deficiency, also known as lactose intolerance, is the most common enzyme deficiency worldwide. It is caused by developmental down- regulation of lactase activity during childhood or early adulthood. The decline of lactase activity is a normal physiological phenomenon; however, the majority of Northern Europeans have the ability to maintain lactase activity and digest lactose throughout life (lactase persistence). The down-regulation of lactase activity operates at the transcriptional level and it is associated with a noncoding variation in the MCM6 gene, located in the upstream vicinity of LCT. {ECO:0000269PubMed:16400612}. Note=The disease is caused by mutations affecting the gene represented in this entry.
Tissue Specificity Intestine.
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 4 experimentally validated interaction(s) in this database.
Experimentally validated
Total 4 [view]
Protein-Protein 4 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0000016 lactase activity
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0017042 glycosylceramidase activity
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0044245 polysaccharide digestion
GO:0044281 small molecule metabolic process
Cellular Component
GO:0005886 plasma membrane
GO:0005887 integral component of plasma membrane
GO:0016020 membrane
GO:0016324 apical plasma membrane
Protein Structure and Domains
PDB ID
InterPro IPR001360 Glycoside hydrolase, family 1
IPR017853 Glycoside hydrolase, superfamily
PFAM PF00232
PRINTS PR00131
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt P09848
PhosphoSite PhosphoSite-P09848
TrEMBL
UniProt Splice Variant
Entrez Gene 3938
UniGene Hs.551506
RefSeq NP_002290
HUGO HGNC:6530
OMIM 603202
CCDS CCDS2178
HPRD 04437
IMGT
EMBL AC011893 M61834 M61835 M61836 M61837 M61838 M61839 M61840 M61841 M61842 M61843 M61844 M61845 M61846 M61847 M61848 M61849 M61850 X07994
GenPept AAA59504 AAX88924 CAA30801