Version 5.4
Homo sapiens Protein: ZKSCAN3
Summary
InnateDB Protein IDBP-71980.5
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol ZKSCAN3
Protein Name zinc finger with KRAB and SCAN domains 3
Synonyms
Species Homo sapiens
Ensembl Protein ENSP00000341883
InnateDB Gene IDBG-71974 (ZKSCAN3)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
Experimentally validated
Total 5 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0003682 chromatin binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0043565 sequence-specific DNA binding
GO:0046872 metal ion binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0006914 autophagy
GO:0007040 lysosome organization
GO:0010507 negative regulation of autophagy
GO:0045892 negative regulation of transcription, DNA-templated
GO:0045893 positive regulation of transcription, DNA-templated
GO:2000773 negative regulation of cellular senescence
Cellular Component
GO:0005622 intracellular
GO:0005634 nucleus
GO:0005737 cytoplasm
Protein Structure and Domains
PDB ID
InterPro IPR001909 Krueppel-associated box
IPR007087 Zinc finger, C2H2
IPR015880 Zinc finger, C2H2-like
PFAM PF01352
PF00096
PRINTS
PIRSF
SMART SM00349
SM00355
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q9BRR0
PhosphoSite PhosphoSite-Q9BRR0
TrEMBL
UniProt Splice Variant
Entrez Gene 80317
UniGene Hs.606130
RefSeq NP_001229824
HUGO HGNC:13853
OMIM 612791
CCDS CCDS56408
HPRD 11705
IMGT
EMBL AK122790 AK313532 AL021997 AL358785 BC006118 BT007427 CH471081 U71601
GenPept AAB16813 AAH06118 AAP36095 BAG36309 BAG53732 CAH71668 CAI23088 EAX03157

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca