InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Ldb1

Summary

InnateDB Protein

IDBP-788150.1

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Ldb1

Protein Name

LIM domain binding 1

Synonyms

CLIM2; NLI;

Species

Mus musculus

Ensembl Protein

ENSMUSP00000139562

InnateDB Gene

IDBG-171764 (Ldb1)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 53 experimentally validated interaction(s) in this database.
They are also associated with 27 interaction(s) predicted by orthology.

Experimentally validated
Total	53 [view]
Protein-Protein	33 [view]
Protein-DNA	20 [view]
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	27 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0000989	transcription factor binding transcription factor activity
GO:0001102	RNA polymerase II activating transcription factor binding
GO:0001158	enhancer sequence-specific DNA binding
GO:0003677	DNA binding
GO:0003682	chromatin binding
GO:0003712	transcription cofactor activity
GO:0005515	protein binding
GO:0019899	enzyme binding
GO:0030274	LIM domain binding
GO:0042803	protein homodimerization activity
GO:0043621	protein self-association

Biological Process

GO:0000972	transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0001702	gastrulation with mouth forming second
GO:0001942	hair follicle development
GO:0006366	transcription from RNA polymerase II promoter
GO:0009948	anterior/posterior axis specification
GO:0010669	epithelial structure maintenance
GO:0016055	Wnt signaling pathway
GO:0021549	cerebellum development
GO:0021702	cerebellar Purkinje cell differentiation
GO:0022607	cellular component assembly
GO:0030182	neuron differentiation
GO:0032784	regulation of DNA-templated transcription, elongation
GO:0035019	somatic stem cell maintenance
GO:0043973	histone H3-K4 acetylation
GO:0045647	negative regulation of erythrocyte differentiation
GO:0045785	positive regulation of cell adhesion
GO:0045892	negative regulation of transcription, DNA-templated
GO:0045944	positive regulation of transcription from RNA polymerase II promoter
GO:0046985	positive regulation of hemoglobin biosynthetic process
GO:0060319	primitive erythrocyte differentiation
GO:0060322	head development