Version 5.4
Homo sapiens Protein: PRDM13
Summary
InnateDB Protein IDBP-94627.7
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PRDM13
Protein Name PR domain containing 13
Synonyms
Species Homo sapiens
Ensembl Protein ENSP00000358217
InnateDB Gene IDBG-94625 (PRDM13)
Protein Structure
UniProt Annotation
Function May be involved in transcriptional regulation.
Subcellular Localization Nucleus {ECO:0000305}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003682 chromatin binding
GO:0005515 protein binding
GO:0008168 methyltransferase activity
GO:0046872 metal ion binding
Biological Process
GO:0000122 negative regulation of transcription from RNA polymerase II promoter
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0022008 neurogenesis
GO:0032259 methylation
Cellular Component
GO:0005634 nucleus
Protein Structure and Domains
PDB ID
InterPro IPR001214 SET domain
IPR007087 Zinc finger, C2H2
IPR015880 Zinc finger, C2H2-like
PFAM PF00856
PF00096
PRINTS
PIRSF
SMART SM00317
SM00355
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q9H4Q3
PhosphoSite PhosphoSite-Q9H4Q3
TrEMBL Q7Z5E7
UniProt Splice Variant
Entrez Gene 59336
UniGene Hs.287386
RefSeq NP_067633
HUGO HGNC:13998
OMIM
CCDS CCDS43487
HPRD 17901
IMGT
EMBL AL035087 AL137784 AY004253 AY130010 CH471051
GenPept AAG13448 AAN05093 CAI19763 CAI19764 CAI22063 CAI22064 EAW48462

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca