Version 5.4
Homo sapiens Gene: PHTF1
Summary
InnateDB Gene IDBG-101207.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PHTF1
Gene Name putative homeodomain transcription factor 1
Synonyms PHTF
Species Homo sapiens
Ensembl Gene ENSG00000116793
Encoded Proteins
IDBP-101209
putative homeodomain transcription factor 1
IDBP-101211
putative homeodomain transcription factor 1
IDBP-101213
putative homeodomain transcription factor 1
IDBP-101221
putative homeodomain transcription factor 1
IDBP-243778
putative homeodomain transcription factor 1
IDBP-387787
putative homeodomain transcription factor 1
IDBP-387789
putative homeodomain transcription factor 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 1:113696831-113759489
Strand Reverse strand
Band p13.2
Transcripts
ENST00000369604 ENSP00000358617
ENST00000369600 ENSP00000358613
ENST00000369598 ENSP00000358611
ENST00000357783 ENSP00000350428
ENST00000393357 ENSP00000377025
ENST00000412670 ENSP00000416810
ENST00000446739 ENSP00000404690
ENST00000474926
ENST00000481652
ENST00000472612
ENST00000486855
ENST00000493212
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 3 [view]
Protein-Protein 1 [view]
Protein-DNA 2 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003700 sequence-specific DNA binding transcription factor activity
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
Cellular Component
GO:0005634 nucleus
GO:0005783 endoplasmic reticulum
GO:0005801 cis-Golgi network
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000058388
View Gene Order
ENSBTAG00000019615
Not yet available
Cross-References
SwissProt Q9UMS5
TrEMBL F6T5D1
UniProt Splice Variant
Entrez Gene 10745
UniGene Hs.597197 Hs.655824
RefSeq NM_006608 XM_005270383 XM_005270385 XM_005270387 XM_006710297 XM_005270384
HUGO HGNC:8939
OMIM 604950
CCDS CCDS861
HPRD 09227
IMGT
EMBL AJ011863 AL133517 AL365321 BC002447
GenPept AAH02447 CAB51572 CAH72503 CAH72504 CAI22547 CAI22549
RNA Seq Atlas 10745

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca