Version 5.4
Homo sapiens Gene: B3GALNT2
Summary
InnateDB Gene IDBG-107551.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol B3GALNT2
Gene Name beta-1,3-N-acetylgalactosaminyltransferase 2
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000162885
Encoded Proteins
IDBP-107553
beta-1,3-N-acetylgalactosaminyltransferase 2
IDBP-107557
beta-1,3-N-acetylgalactosaminyltransferase 2
IDBP-807358
beta-1,3-N-acetylgalactosaminyltransferase 2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a member of the glycosyltransferase 31 family. The encoded protein synthesizes GalNAc:beta-1,3GlcNAc, a novel carbohydrate structure, on N- and O-glycans. Alternatively spliced transcript variants that encode different isoforms have been described. [provided by RefSeq, Mar 2013]
Gene Information
Type Protein coding
Genomic Location Chromosome 1:235449923-235504481
Strand Reverse strand
Band q42.3
Transcripts
ENST00000366600 ENSP00000355559
ENST00000313984 ENSP00000315678
ENST00000477694
ENST00000462374
ENST00000494378
ENST00000461994
ENST00000612859 ENSP00000481548
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0008375 acetylglucosaminyltransferase activity
GO:0008376 acetylgalactosaminyltransferase activity
GO:0008378 galactosyltransferase activity
Biological Process
GO:0006486 protein glycosylation
GO:0006493 protein O-linked glycosylation
Cellular Component
GO:0000139 Golgi membrane
GO:0005783 endoplasmic reticulum
GO:0016020 membrane
GO:0016021 integral component of membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000039242
View Gene Order
ENSBTAG00000013750
Not yet available
Cross-References
SwissProt Q8NCR0
TrEMBL
UniProt Splice Variant
Entrez Gene 148789
UniGene Hs.743413
RefSeq NM_152490 NM_001277155
HUGO HGNC:28596
OMIM 610194
CCDS CCDS1606 CCDS60453
HPRD 16533
IMGT
EMBL AB209046 AL135928 BC016974 BC029564
GenPept AAH16974 AAH29564 BAD92283 CAI21727 CAI21728
RNA Seq Atlas 148789

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: [email protected]