Version 5.4
Mus musculus Gene: Carhsp1
Summary
InnateDB Gene IDBG-131822.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Carhsp1
Gene Name calcium regulated heat stable protein 1
Synonyms 1200011K09Rik; Crhsp-24; D16Ertd465e
Species Mus musculus
Ensembl Gene ENSMUSG00000008393
Encoded Proteins
IDBP-131824
calcium regulated heat stable protein 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000153048:
Gene Information
Type Protein coding
Genomic Location Chromosome 16:8658587-8672153
Strand Reverse strand
Band A1
Transcripts
ENSMUST00000008537 ENSMUSP00000008537
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 11 experimentally validated interaction(s) in this database.
They are also associated with 10 interaction(s) predicted by orthology.
Experimentally validated
Total 11 [view]
Protein-Protein 10 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 10 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0003730 mRNA 3'-UTR binding
GO:0005515 protein binding
Biological Process
GO:0006355 regulation of transcription, DNA-templated
GO:0043488 regulation of mRNA stability
Cellular Component
GO:0000177 cytoplasmic exosome (RNase complex)
GO:0000932 cytoplasmic mRNA processing body
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0043186 P granule
GO:0070062 extracellular vesicular exosome
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000153048
View Gene Order
ENSBTAG00000001441
Not yet available
Cross-References
SwissProt Q9CR86
TrEMBL Q5M9P7
UniProt Splice Variant
Entrez Gene 52502
UniGene Mm.142095 Mm.444863 Mm.448597
RefSeq NM_025821 XM_006522346 XM_006522347 XM_006522348
OMIM
CCDS CCDS27942
HPRD
IMGT
MGI ID MGI:1196368
MGI Symbol Carhsp1
EMBL AF414101 AK002853 AK003926 AK004711 AK143612 AK149875 AK155318 AK158252 AK165373 AK168504 AK170411 AK171282 BC011225 BC086754 CH466521 CH466530
GenPept AAH11225 AAH86754 AAL07470 BAB22408 BAB23077 BAB23495 BAE25463 BAE29139 BAE33186 BAE34427 BAE38151 BAE40388 BAE41777 BAE42365 EDK97296 EDL35034
RNA Seq Atlas 52502

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca