Version 5.4
Mus musculus Gene: Polr3a
Summary
InnateDB Gene IDBG-138475.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Polr3a
Gene Name polymerase (RNA) III (DNA directed) polypeptide A
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000025280
Encoded Proteins
IDBP-138477
polymerase (RNA) III (DNA directed) polypeptide A
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000148606:
The protein encoded by this gene is the catalytic component of RNA polymerase III, which synthesizes small RNAs. The encoded protein also acts as a sensor to detect foreign DNA and trigger an innate immune response. [provided by RefSeq, Aug 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 14:24448694-24487046
Strand Reverse strand
Band A3
Transcripts
ENSMUST00000026322 ENSMUSP00000026322
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 25 interaction(s) predicted by orthology.
Predicted by orthology
Total 25 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0001056 RNA polymerase III activity
GO:0003677 DNA binding
GO:0003682 chromatin binding
GO:0003899 DNA-directed RNA polymerase activity
GO:0008270 zinc ion binding
GO:0032549 ribonucleoside binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006383 transcription from RNA polymerase III promoter
GO:0032728 positive regulation of interferon-beta production
GO:0045087 innate immune response
Cellular Component
GO:0005666 DNA-directed RNA polymerase III complex
GO:0016020 membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000148606
View Gene Order
ENSBTAG00000013259
Not yet available
Pathways
NETPATH
REACTOME
KEGG
mmu00240
Pyrimidine metabolism pathway
mmu03020
RNA polymerase pathway
mmu00230
Purine metabolism pathway
mmu04623
Cytosolic DNA-sensing pathway pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_22339
RNA Polymerase III Abortive And Retractive Initiation pathway
REACT_63
RNA Polymerase III Transcription Termination pathway
REACT_756
RNA Polymerase III Chain Elongation pathway
REACT_571
RNA Polymerase III Transcription Initiation From Type 3 Promoter pathway
REACT_1036
RNA Polymerase III Transcription Initiation From Type 2 Promoter pathway
REACT_347
RNA Polymerase III Transcription Initiation From Type 1 Promoter pathway
REACT_281
RNA Polymerase III Transcription Initiation pathway
REACT_6802
Innate Immune System pathway
REACT_6900
Immune System pathway
REACT_1371
RNA Polymerase III Transcription pathway
REACT_21352
RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription pathway
REACT_118823
Cytosolic sensors of pathogen-associated DNA pathway
REACT_71
Gene Expression pathway
REACT_216178
RNA Polymerase III Transcription pathway
REACT_206651
RNA Polymerase III Transcription Initiation From Type 1 Promoter pathway
REACT_220514
RNA Polymerase III Transcription Initiation From Type 2 Promoter pathway
REACT_220974
Cytosolic sensors of pathogen-associated DNA pathway
REACT_203707
RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription pathway
REACT_226022
Gene Expression pathway
REACT_213138
Immune System pathway
REACT_212144
RNA Polymerase III Transcription Initiation pathway
REACT_209748
RNA Polymerase III Abortive And Retractive Initiation pathway
REACT_216714
Innate Immune System pathway
REACT_203737
RNA Polymerase III Chain Elongation pathway
REACT_221998
RNA Polymerase III Transcription Initiation From Type 3 Promoter pathway
REACT_224876
RNA Polymerase III Transcription Termination pathway
KEGG
hsa00240
Pyrimidine metabolism pathway
hsa00230
Purine metabolism pathway
hsa03020
RNA polymerase pathway
hsa04623
Cytosolic DNA-sensing pathway pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL B2RXC6
UniProt Splice Variant
Entrez Gene 218832
UniGene
RefSeq NM_001081247
OMIM
CCDS CCDS36828
HPRD
IMGT
MGI ID MGI:2681836
MGI Symbol Polr3a
EMBL AC154573 BC151002 BC151168 BC151169
GenPept AAI51003 AAI51169 AAI51170
RNA Seq Atlas 218832

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca