Homo sapiens Gene: IFFO1
Summary
InnateDB Gene IDBG-14327.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol IFFO1
Gene Name intermediate filament family orphan 1
Synonyms HOM-TES-103; IFFO;
Species Homo sapiens
Ensembl Gene ENSG00000010295
Encoded Proteins
intermediate filament family orphan 1
intermediate filament family orphan 1
intermediate filament family orphan 1
intermediate filament family orphan 1
intermediate filament family orphan 1
intermediate filament family orphan 1
intermediate filament family orphan 1
intermediate filament family orphan 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene is a member of the intermediate filament family. Intermediate filaments are proteins which are primordial components of the cytoskeleton and nuclear envelope. The proteins encoded by the members of this gene family are evolutionarily and structurally related but have limited sequence homology, with the exception of the central rod domain. Multiple alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 12:6538375-6556083
Strand Reverse strand
Band p13.31
Transcripts
ENST00000356896 ENSP00000349364
ENST00000336604 ENSP00000337593
ENST00000396840 ENSP00000380052
ENST00000396830
ENST00000436152 ENSP00000390721
ENST00000465801 ENSP00000436261
ENST00000471408
ENST00000472558
ENST00000487279 ENSP00000432493
ENST00000488007
ENST00000619571 ENSP00000482285
ENST00000615885 ENSP00000482340
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 8 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 8 [view]
Protein-Protein 8 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005198 structural molecule activity
Biological Process
Cellular Component
GO:0005882 intermediate filament
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
Method
Confidence
Comments
SSD Ortholog
Ortholog supports species divergence
Not yet available
SSD Ortholog
Ortholog supports species divergence
Cross-References
SwissProt Q0D2I5
TrEMBL B4DQQ1 E9PPX7 F8W8H2 Q9Y4M3
UniProt Splice Variant
Entrez Gene 25900
UniGene Hs.15243 Hs.628927
RefSeq NM_001039670 NM_001193457 NM_080730 XM_006718973 XM_006718974 XM_006718975 XM_006718976 XM_006718977 XM_006718978 XM_006718980 XM_006718981 XM_006718982
HUGO HGNC:24970
OMIM 610495
CCDS CCDS41741 CCDS73425 CCDS8550
HPRD
IMGT
EMBL AC006064 AF124432 AK298905 AL080214 BC002857 BC004384 BC010431 BC071170 BC103817 BC103818 BC110387 BC113848 BC114454 CH471116
GenPept AAH02857 AAH04384 AAH71170 AAI03818 AAI03819 AAI10388 AAI13849 AAI14455 BAG61013 CAB45778 EAW88781 EAW88783
RNA Seq Atlas 25900