Version 5.4
Mus musculus Gene: Slc39a10
Summary
InnateDB Gene IDBG-152019.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Slc39a10
Gene Name solute carrier family 39 (zinc transporter), member 10
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000025986
Encoded Proteins
IDBP-152021
solute carrier family 39 (zinc transporter), member 10
IDBP-789863
solute carrier family 39 (zinc transporter), member 10
IDBP-789864
solute carrier family 39 (zinc transporter), member 10
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000196950:
Zinc is an essential cofactor for hundreds of enzymes. It is involved in protein, nucleic acid, carbohydrate, and lipid metabolism, as well as in the control of gene transcription, growth, development, and differentiation. SLC39A10 belongs to a subfamily of proteins that show structural characteristics of zinc transporters (Taylor and Nicholson, 2003 [PubMed 12659941]).[supplied by OMIM, Mar 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 1:46807544-46892852
Strand Reverse strand
Band C1.1
Transcripts
ENSMUST00000027131 ENSMUSP00000027131
ENSMUST00000141226
ENSMUST00000186852 ENSMUSP00000140176
ENSMUST00000185520 ENSMUSP00000140570
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0046873 metal ion transmembrane transporter activity
Biological Process
GO:0006829 zinc ion transport
GO:0008150 biological_process
GO:0030001 metal ion transport
GO:0051260 protein homooligomerization
GO:0055085 transmembrane transport
Cellular Component
GO:0005575 cellular_component
GO:0016020 membrane
GO:0016021 integral component of membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000196950
View Gene Order
ENSBTAG00000016782
Not yet available
Pathways
NETPATH
REACTOME
REACT_217615
Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compounds pathway
REACT_247550
SLC-mediated transmembrane transport pathway
REACT_198240
Zinc influx into cells by the SLC39 gene family pathway
REACT_243781
Zinc transporters pathway
REACT_253400
Transmembrane transport of small molecules pathway
REACT_251299
Metal ion SLC transporters pathway
KEGG
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_20603
Zinc influx into cells by the SLC39 gene family pathway
REACT_20547
Metal ion SLC transporters pathway
REACT_19305
Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compounds pathway
REACT_15518
Transmembrane transport of small molecules pathway
REACT_20530
Zinc transporters pathway
REACT_19118
SLC-mediated transmembrane transport pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt Q6P5F6
TrEMBL
UniProt Splice Variant
Entrez Gene 227059
UniGene Mm.233889 Mm.398204 Mm.475398
RefSeq NM_172653 XM_006495932 XM_006495933 XM_006495934 XM_006495935
OMIM
CCDS CCDS14936
HPRD
IMGT
MGI ID MGI:1914515
MGI Symbol Slc39a10
EMBL AK030685 AK049099 AK122483 BC052880 BC059214 BC062918
GenPept AAH52880 AAH59214 AAH62918 BAC27077 BAC33542 BAC65765
RNA Seq Atlas 227059

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca