Version 5.4
Mus musculus Gene: Rbm42
Summary
InnateDB Gene IDBG-170710.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rbm42
Gene Name RNA binding motif protein 42
Synonyms 1700003D06Rik; 3100004P22Rik
Species Mus musculus
Ensembl Gene ENSMUSG00000036733
Encoded Proteins
IDBP-170712
RNA binding motif protein 42
IDBP-265162
RNA binding motif protein 42
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000126254:
Gene Information
Type Protein coding
Genomic Location Chromosome 7:30640994-30650317
Strand Reverse strand
Band B1
Transcripts
ENSMUST00000042726 ENSMUSP00000040005
ENSMUST00000108141 ENSMUSP00000103776
ENSMUST00000140550
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 4 experimentally validated interaction(s) in this database.
They are also associated with 18 interaction(s) predicted by orthology.
Experimentally validated
Total 4 [view]
Protein-Protein 4 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 18 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0044822 poly(A) RNA binding
Biological Process
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000126254
View Gene Order
ENSBTAG00000013440
Not yet available
Cross-References
SwissProt Q91V81
TrEMBL D3YYW8
UniProt Splice Variant
Entrez Gene 68035
UniGene Mm.401747
RefSeq NM_133693
OMIM
CCDS CCDS52179
HPRD
IMGT
MGI ID MGI:1915285
MGI Symbol Rbm42
EMBL AC167978 AK151000 BC009148 BC011286 BC027372 BC057928
GenPept AAH09148 AAH11286 AAH27372 AAH57928 BAE30024
RNA Seq Atlas 68035

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca