Mus musculus Gene: Trmu
Summary
InnateDB Gene IDBG-170915.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Trmu
Gene Name tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Synonyms 1110005N20Rik; 1600025P05Rik; AI314320; Trmt1;
Species Mus musculus
Ensembl Gene ENSMUSG00000022386
Encoded Proteins
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000100416:
This gene is a member of the trmU family. It encodes a mitochondria-specific tRNA-modifying enzyme that is required for the 2-thio modification of 5-taurinomethyl-2-thiouridine tRNA-Lys on the wobble position of the anticodon. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 15:85879312-85897394
Strand Forward strand
Band E2
Transcripts
ENSMUST00000023019 ENSMUSP00000023019
ENSMUST00000162491 ENSMUSP00000125704
ENSMUST00000160733 ENSMUSP00000125331
ENSMUST00000162601
ENSMUST00000162339 ENSMUSP00000125266
ENSMUST00000161784
ENSMUST00000162010
ENSMUST00000159362
ENSMUST00000159730
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000049 tRNA binding
GO:0003674 molecular_function
GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity
GO:0004810 tRNA adenylyltransferase activity
GO:0005524 ATP binding
GO:0016740 transferase activity
GO:0016783 sulfurtransferase activity
Biological Process
GO:0006529 asparagine biosynthetic process
GO:0008033 tRNA processing
GO:0008150 biological_process
Cellular Component
GO:0005737 cytoplasm
GO:0005739 mitochondrion
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
Method
Confidence
Comments
SSD Ortholog
Ortholog supports species divergence
Not yet available
SSD Ortholog
Ortholog supports species divergence
Pathways
NETPATH
REACTOME
KEGG
Sulfur relay system pathway
INOH
PID BIOCARTA
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
Sulfur relay system pathway
INOH
PID BIOCARTA
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq NM_028063
OMIM
CCDS CCDS27726
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas