Version 5.4
Mus musculus Gene: Thumpd3
Summary
InnateDB Gene IDBG-175601.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Thumpd3
Gene Name THUMP domain containing 3
Synonyms AW556087; Gt(ROSA)26asSor; Gtrosa26as
Species Mus musculus
Ensembl Gene ENSMUSG00000030264
Encoded Proteins
IDBP-175603
THUMP domain containing 3
IDBP-535791
THUMP domain containing 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000134077:
Gene Information
Type Protein coding
Genomic Location Chromosome 6:113046225-113068273
Strand Forward strand
Band E3
Transcripts
ENSMUST00000032398 ENSMUSP00000032398
ENSMUST00000155378 ENSMUSP00000120509
ENSMUST00000137396
ENSMUST00000145054
ENSMUST00000152795
ENSMUST00000138278
ENSMUST00000134657
ENSMUST00000153310
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 9 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 0
Protein-DNA 0
Protein-RNA 1 [view]
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 9 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0003723 RNA binding
GO:0008168 methyltransferase activity
Biological Process
GO:0008150 biological_process
GO:0032259 methylation
Cellular Component
GO:0005730 nucleolus
GO:0005737 cytoplasm
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000134077
View Gene Order
ENSBTAG00000003112
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.398493 Mm.781
RefSeq NM_008188 XM_006505577 XM_006505578 XM_006505579
OMIM
CCDS CCDS20410
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca