Version 5.4
Mus musculus Gene: Ankrd17
Summary
InnateDB Gene IDBG-178064.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Ankrd17
Gene Name ankyrin repeat domain 17
Synonyms 4933425K22Rik; A130069E23Rik; A930008M01; AA407558; AA516750; AU040470; Foe; Gtar; Mask; mKIAA0697
Species Mus musculus
Ensembl Gene ENSMUSG00000055204
Encoded Proteins
IDBP-178066
ankyrin repeat domain 17
IDBP-178068
ankyrin repeat domain 17
IDBP-624899
ankyrin repeat domain 17
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
InnateDB Annotation from Orthologs
Summary
PMID 23711367
[Homo sapiens] ANKRD17 binds to NOD2 and contributes to inflammatory responses against Shigella flexneri.
Entrez Gene
Summary This gene encodes a protein with ankyrin repeats, which are associated with protein-protein interactions. Studies suggest that this protein is involved in liver development. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 5:90227190-90366185
Strand Reverse strand
Band E1
Transcripts
ENSMUST00000014421 ENSMUSP00000014421
ENSMUST00000081914 ENSMUSP00000080587
ENSMUST00000168058 ENSMUSP00000128960
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
They are also associated with 9 interaction(s) predicted by orthology.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 9 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0001955 blood vessel maturation
GO:0007492 endoderm development
GO:0051151 negative regulation of smooth muscle cell differentiation
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0016020 membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000132466
View Gene Order
ENSBTAG00000004912
Not yet available
Cross-References
SwissProt Q99NH0
TrEMBL
UniProt Splice Variant
Entrez Gene 81702
UniGene Mm.245522 Mm.397380 Mm.413338
RefSeq NM_030886 XM_006535287 XM_006535291 NM_198010 XM_006535289
OMIM
CCDS CCDS57354 CCDS57353
HPRD
IMGT
MGI ID MGI:1932101
MGI Symbol Ankrd17
EMBL AC117578 AC162171 AF130371 AK129193 AK160263 AY026253 BC039213 BC057195
GenPept AAH39213 AAH57195 AAK07672 AAQ13559 BAC98003 BAE35720
RNA Seq Atlas 81702

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca