Version 5.4
Mus musculus Gene: Scaf1
Summary
InnateDB Gene IDBG-181155.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Scaf1
Gene Name SR-related CTD-associated factor 1
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000038406
Encoded Proteins
IDBP-181157
SR-related CTD-associated factor 1
IDBP-400866
SR-related CTD-associated factor 1
IDBP-533778
SR-related CTD-associated factor 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000126461:
Gene Information
Type Protein coding
Genomic Location Chromosome 7:45002948-45016363
Strand Reverse strand
Band B3
Transcripts
ENSMUST00000085383 ENSMUSP00000082501
ENSMUST00000117282 ENSMUSP00000114117
ENSMUST00000148227
ENSMUST00000153243
ENSMUST00000139035
ENSMUST00000151264 ENSMUSP00000118788
ENSMUST00000131262
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003723 RNA binding
GO:0019904 protein domain specific binding
Biological Process
GO:0006366 transcription from RNA polymerase II promoter
GO:0006397 mRNA processing
GO:0008380 RNA splicing
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000126461
View Gene Order
ENSBTAG00000006612
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.28298
RefSeq NM_001008422 XM_006540820 XM_006540821
OMIM
CCDS CCDS21225
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca