Version 5.4
Mus musculus Gene: Ubd
Summary
InnateDB Gene IDBG-182308.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Ubd
Gene Name ubiquitin D
Synonyms FAT10
Species Mus musculus
Ensembl Gene ENSMUSG00000035186
Encoded Proteins
IDBP-182310
ubiquitin D
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
InnateDB Annotation from Orthologs
Summary
PMID 19959714
[Homo sapiens] UBD mediates NF-kappaB activation and may promote tubulointerstitial inflammation in chronic kidney diseases.
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000213886:
Gene Information
Type Protein coding
Genomic Location Chromosome 17:37193892-37196095
Strand Forward strand
Band B1
Transcripts
ENSMUST00000038844 ENSMUSP00000035808
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
They are also associated with 471 interaction(s) predicted by orthology.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 471 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0070628 proteasome binding
Biological Process
GO:0006511 ubiquitin-dependent protein catabolic process
GO:0010243 response to organonitrogen compound
GO:0016567 protein ubiquitination
GO:0032446 protein modification by small protein conjugation
GO:0034341 response to interferon-gamma
GO:0034612 response to tumor necrosis factor
GO:0043011 myeloid dendritic cell differentiation
GO:0043065 positive regulation of apoptotic process
GO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0070842 aggresome assembly
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0016235 aggresome
Orthologs
Species
Homo sapiens
Gene ID
Gene Order
ENSG00000213886
View Gene Order
Cross-References
SwissProt P63072
TrEMBL
UniProt Splice Variant
Entrez Gene 24108
UniGene Mm.140210
RefSeq NM_023137
OMIM
CCDS CCDS28737
HPRD
IMGT
MGI ID MGI:1344410
MGI Symbol Ubd
EMBL AF314088 AK008116 AK008552 AL078630 BC027627 BC036383 CT010257
GenPept AAG27477 AAH27627 AAH36383 BAB25471 BAB25738 CAJ18465
RNA Seq Atlas 24108

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca