Version 5.4
Mus musculus Gene: Thsd7b
Summary
InnateDB Gene IDBG-190016.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Thsd7b
Gene Name thrombospondin, type I, domain containing 7B
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000042581
Encoded Proteins
IDBP-190018
thrombospondin, type I, domain containing 7B
IDBP-190020
thrombospondin, type I, domain containing 7B
IDBP-542476
thrombospondin, type I, domain containing 7B
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000144229:
Gene Information
Type Protein coding
Genomic Location Chromosome 1:129273302-130219278
Strand Forward strand
Band E4
Transcripts
ENSMUST00000040311 ENSMUSP00000041716
ENSMUST00000073527 ENSMUSP00000073220
ENSMUST00000148051
ENSMUST00000140629
ENSMUST00000152305 ENSMUSP00000117750
ENSMUST00000151700
ENSMUST00000140834
ENSMUST00000143130
ENSMUST00000190870
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
Biological Process
GO:0008150 biological_process
Cellular Component
GO:0005575 cellular_component
GO:0016021 integral component of membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000144229
View Gene Order
ENSBTAG00000044055
Not yet available
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_22161
Post-translational protein modification pathway
REACT_200727
O-linked glycosylation pathway
REACT_17015
Metabolism of proteins pathway
REACT_200626
O-glycosylation of TSR domain-containing proteins pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL D3Z366 Q8BHP3
UniProt Splice Variant
Entrez Gene 210417
UniGene Mm.380518 Mm.399404
RefSeq NM_172485 XM_006529337
OMIM
CCDS CCDS15255
HPRD
IMGT
MGI ID MGI:2443925
MGI Symbol Thsd7b
EMBL AC110536 AC121276 AC123741 AC124806 AC158148 AC158746 AC170749 AC170992 AK051714
GenPept BAC34732
RNA Seq Atlas 210417

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca