Version 5.4
Mus musculus Gene: Zcchc17
Summary
InnateDB Gene IDBG-192683.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Zcchc17
Gene Name zinc finger, CCHC domain containing 17
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000028772
Encoded Proteins
IDBP-542760
zinc finger, CCHC domain containing 17
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000121766:
Gene Information
Type Protein coding
Genomic Location Chromosome 4:130315383-130359943
Strand Reverse strand
Band D2.2
Transcripts
ENSMUST00000134159 ENSMUSP00000120807
ENSMUST00000141615
ENSMUST00000149755
ENSMUST00000129840
ENSMUST00000167964
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 6 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 0
Protein-DNA 0
Protein-RNA 1 [view]
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 6 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0008270 zinc ion binding
Biological Process
Cellular Component
GO:0005730 nucleolus
GO:0022625 cytosolic large ribosomal subunit
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000121766
View Gene Order
ENSBTAG00000016818
Not yet available
Cross-References
SwissProt Q9ESX4
TrEMBL Q3TG23 Q3TT47
UniProt Splice Variant
Entrez Gene 619605
UniGene Mm.297196 Mm.420278 Mm.446462
RefSeq NM_153160 XM_006503257 XM_006503258 XM_006503259
OMIM
CCDS CCDS38891
HPRD
IMGT
MGI ID MGI:1919955
MGI Symbol Zcchc17
EMBL AJ272345 AK152289 AK161588 AK168912 AY253297 BC018382 BC049231 CH466552
GenPept AAH18382 AAH49231 AAO83392 BAE31100 BAE36478 BAE40725 CAC03718 EDL30139
RNA Seq Atlas 619605

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca