Version 5.4
| Mus musculus Gene: Rfc2 | |||||||||||||||||||||||
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| Summary | |||||||||||||||||||||||
| InnateDB Gene | IDBG-202915.6 | ||||||||||||||||||||||
| Last Modified | 2014-10-13 [Report errors or provide feedback] | ||||||||||||||||||||||
| Gene Symbol | Rfc2 | ||||||||||||||||||||||
| Gene Name | replication factor C (activator 1) 2 | ||||||||||||||||||||||
| Synonyms | 2610008M13Rik; 40kDa; AI326953; Recc2 | ||||||||||||||||||||||
| Species | Mus musculus | ||||||||||||||||||||||
| Ensembl Gene | ENSMUSG00000023104 | ||||||||||||||||||||||
| Encoded Proteins |
replication factor C (activator 1) 2
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| Protein Structure |
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| Useful resources | Stemformatics EHFPI ImmGen | ||||||||||||||||||||||
| Entrez Gene | |||||||||||||||||||||||
| Summary |
This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000049541:
The elongation of primed DNA templates by DNA polymerase delta and epsilon requires the action of the accessory proteins, proliferating cell nuclear antigen (PCNA) and replication factor C (RFC). RFC, also called activator 1, is a protein complex consisting of five distinct subunits of 145, 40, 38, 37, and 36.5 kD. This gene encodes the 40 kD subunit, which has been shown to be responsible for binding ATP. Deletion of this gene has been associated with Williams syndrome. Alternatively spliced transcript variants encoding distinct isoforms have been described. [provided by RefSeq, Jul 2008] This gene encodes a member of the activator 1 small subunits family. The elongation of primed DNA templates by DNA polymerase delta and epsilon requires the action of the accessory proteins, proliferating cell nuclear antigen (PCNA) and replication factor C (RFC). Replication factor C, also called activator 1, is a protein complex consisting of five distinct subunits. This gene encodes the 40 kD subunit, which has been shown to be responsible for binding ATP and may help promote cell survival. Disruption of this gene is associated with Williams syndrome. Alternatively spliced transcript variants encoding distinct isoforms have been described. A pseudogene of this gene has been defined on chromosome 2. [provided by RefSeq, Jul 2013] |
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| Gene Information | |||||||||||||||||||||||
| Type | Protein coding | ||||||||||||||||||||||
| Genomic Location | Chromosome 5:134582690-134598328 | ||||||||||||||||||||||
| Strand | Forward strand | ||||||||||||||||||||||
| Band | G2 | ||||||||||||||||||||||
| Transcripts |
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| Interactions | |||||||||||||||||||||||
| Number of Interactions |
This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 37 interaction(s) predicted by orthology.
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| Gene Ontology | |||||||||||||||||||||||
Molecular Function |
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| Biological Process |
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| Cellular Component |
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| Orthologs | |||||||||||||||||||||||
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Species
Homo sapiens
Bos taurus
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Gene ID
Gene Order
Not yet available
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| Pathways | |||||||||||||||||||||||
| NETPATH | |||||||||||||||||||||||
| REACTOME |
Transcription-coupled NER (TC-NER) pathway
Cell Cycle, Mitotic pathway
Gap-filling DNA repair synthesis and ligation in TC-NER pathway
Chromosome Maintenance pathway
Synthesis of DNA pathway
DNA strand elongation pathway
Repair synthesis for gap-filling by DNA polymerase in TC-NER pathway
DNA Replication pathway
Global Genomic NER (GG-NER) pathway
Gap-filling DNA repair synthesis and ligation in GG-NER pathway
Telomere Maintenance pathway
Cell Cycle pathway
Nucleotide Excision Repair pathway
Cell Cycle Checkpoints pathway
Repair synthesis of patch ~27-30 bases long by DNA polymerase pathway
DNA Repair pathway
Leading Strand Synthesis pathway
Telomere C-strand (Lagging Strand) Synthesis pathway
G2/M Checkpoints pathway
Extension of Telomeres pathway
Polymerase switching pathway
Activation of ATR in response to replication stress pathway
Lagging Strand Synthesis pathway
Polymerase switching on the C-strand of the telomere pathway
S Phase pathway
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| KEGG |
DNA replication pathway
Nucleotide excision repair pathway
Mismatch repair pathway
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| INOH | |||||||||||||||||||||||
| PID NCI | |||||||||||||||||||||||
| Pathway Predictions based on Human Orthology Data | |||||||||||||||||||||||
| NETPATH | |||||||||||||||||||||||
| REACTOME |
Activation of ATR in response to replication stress pathway
Polymerase switching on the C-strand of the telomere pathway
Telomere C-strand (Lagging Strand) Synthesis pathway
Polymerase switching pathway
Leading Strand Synthesis pathway
Repair synthesis for gap-filling by DNA polymerase in TC-NER pathway
Gap-filling DNA repair synthesis and ligation in TC-NER pathway
Transcription-coupled NER (TC-NER) pathway
Repair synthesis of patch ~27-30 bases long by DNA polymerase pathway
Gap-filling DNA repair synthesis and ligation in GG-NER pathway
DNA Replication pathway
Synthesis of DNA pathway
S Phase pathway
Chromosome Maintenance pathway
G2/M Checkpoints pathway
Global Genomic NER (GG-NER) pathway
Telomere Maintenance pathway
Cell Cycle pathway
Cell Cycle, Mitotic pathway
DNA strand elongation pathway
Extension of Telomeres pathway
Lagging Strand Synthesis pathway
Nucleotide Excision Repair pathway
DNA Repair pathway
Cell Cycle Checkpoints pathway
S Phase pathway
Gap-filling DNA repair synthesis and ligation in TC-NER pathway
Extension of Telomeres pathway
Transcription-coupled NER (TC-NER) pathway
DNA Replication pathway
Telomere Maintenance pathway
Polymerase switching on the C-strand of the telomere pathway
Leading Strand Synthesis pathway
Nucleotide Excision Repair pathway
Cell Cycle, Mitotic pathway
Gap-filling DNA repair synthesis and ligation in GG-NER pathway
Global Genomic NER (GG-NER) pathway
Telomere C-strand (Lagging Strand) Synthesis pathway
Synthesis of DNA pathway
Cell Cycle pathway
DNA Repair pathway
Lagging Strand Synthesis pathway
Chromosome Maintenance pathway
G2/M Checkpoints pathway
Activation of ATR in response to replication stress pathway
Polymerase switching pathway
Repair synthesis of patch ~27-30 bases long by DNA polymerase pathway
Cell Cycle Checkpoints pathway
Repair synthesis for gap-filling by DNA polymerase in TC-NER pathway
DNA strand elongation pathway
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| KEGG |
DNA replication pathway
Nucleotide excision repair pathway
Mismatch repair pathway
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| INOH | |||||||||||||||||||||||
| PID NCI |
Fanconi anemia pathway
ATR signaling pathway
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| Cross-References | |||||||||||||||||||||||
| SwissProt | Q9WUK4 | ||||||||||||||||||||||
| TrEMBL | Q4KL82 Q99K91 | ||||||||||||||||||||||
| UniProt Splice Variant | |||||||||||||||||||||||
| Entrez Gene | 19718 | ||||||||||||||||||||||
| UniGene | Mm.332739 Mm.409955 Mm.447557 | ||||||||||||||||||||||
| RefSeq | NM_020022 | ||||||||||||||||||||||
| OMIM | |||||||||||||||||||||||
| CCDS | CCDS19722 | ||||||||||||||||||||||
| HPRD | |||||||||||||||||||||||
| IMGT | |||||||||||||||||||||||
| MGI ID | MGI:1341868 | ||||||||||||||||||||||
| MGI Symbol | Rfc2 | ||||||||||||||||||||||
| EMBL | AF139987 AF289664 AK075997 AK154681 BC004812 BC023028 BC099370 CH466529 | ||||||||||||||||||||||
| GenPept | AAD34861 AAF99332 AAH04812 AAH23028 AAH99370 BAC36108 BAE32762 EDL19423 | ||||||||||||||||||||||
| RNA Seq Atlas | 19718 | ||||||||||||||||||||||