Version 5.4
Mus musculus Gene: Spsb1
Summary
InnateDB Gene IDBG-205484.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Spsb1
Gene Name splA/ryanodine receptor domain and SOCS box containing 1
Synonyms 1110014L01Rik; 4930422J18Rik; AI596360; AI854583; SSB-1; SSB1
Species Mus musculus
Ensembl Gene ENSMUSG00000039911
Encoded Proteins
IDBP-205486
splA/ryanodine receptor domain and SOCS box containing 1
IDBP-270353
splA/ryanodine receptor domain and SOCS box containing 1
IDBP-270355
splA/ryanodine receptor domain and SOCS box containing 1
IDBP-539152
splA/ryanodine receptor domain and SOCS box containing 1
IDBP-541215
splA/ryanodine receptor domain and SOCS box containing 1
IDBP-533014
splA/ryanodine receptor domain and SOCS box containing 1
IDBP-535998
splA/ryanodine receptor domain and SOCS box containing 1
IDBP-622543
splA/ryanodine receptor domain and SOCS box containing 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000171621:
Gene Information
Type Protein coding
Genomic Location Chromosome 4:149896283-149955043
Strand Reverse strand
Band E2
Transcripts
ENSMUST00000038562 ENSMUSP00000048969
ENSMUST00000105685 ENSMUSP00000101310
ENSMUST00000105684 ENSMUSP00000101309
ENSMUST00000156897 ENSMUSP00000119558
ENSMUST00000149360 ENSMUSP00000117083
ENSMUST00000125135 ENSMUSP00000115149
ENSMUST00000149743 ENSMUSP00000116808
ENSMUST00000156451
ENSMUST00000135896
ENSMUST00000167342 ENSMUSP00000128004
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 16 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 16 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0016567 protein ubiquitination
GO:0035556 intracellular signal transduction
Cellular Component
GO:0005737 cytoplasm
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000171621
View Gene Order
ENSBTAG00000024539
Not yet available
Pathways
NETPATH
REACTOME
REACT_236645
Class I MHC mediated antigen processing & presentation pathway
REACT_230745
Immune System pathway
REACT_199115
Antigen processing: Ubiquitination & Proteasome degradation pathway
REACT_229531
Adaptive Immune System pathway
KEGG
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_75842
Antigen processing: Ubiquitination & Proteasome degradation pathway
REACT_75774
Adaptive Immune System pathway
REACT_6900
Immune System pathway
REACT_75820
Class I MHC mediated antigen processing & presentation pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.30 Mm.468193
RefSeq NM_029035 XM_006537089 XM_006539234
OMIM
CCDS CCDS18966
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca