Version 5.4
Mus musculus Gene: Msi2
Summary
InnateDB Gene IDBG-207963.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Msi2
Gene Name Musashi homolog 2 (Drosophila)
Synonyms 1700105C15Rik; AI451722; AI563628; AW489193; Msi2h
Species Mus musculus
Ensembl Gene ENSMUSG00000069769
Encoded Proteins
IDBP-207965
Musashi homolog 2 (Drosophila)
IDBP-265665
Musashi homolog 2 (Drosophila)
IDBP-265667
Musashi homolog 2 (Drosophila)
IDBP-541174
Musashi homolog 2 (Drosophila)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000153944:
This gene encodes a protein containing two conserved tandem RNA recognition motifs. Similar proteins in other species function as RNA-binding proteins and play central roles in posttranscriptional gene regulation. Two transcript variants encoding distinct isoforms have been identified for this gene. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 11:88339382-88718513
Strand Reverse strand
Band C
Transcripts
ENSMUST00000092794 ENSMUSP00000090470
ENSMUST00000107909 ENSMUSP00000103542
ENSMUST00000107908 ENSMUSP00000103541
ENSMUST00000148013
ENSMUST00000138790
ENSMUST00000144699 ENSMUSP00000119684
ENSMUST00000126293
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 6 experimentally validated interaction(s) in this database.
They are also associated with 5 interaction(s) predicted by orthology.
Experimentally validated
Total 6 [view]
Protein-Protein 4 [view]
Protein-DNA 2 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 5 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003727 single-stranded RNA binding
GO:0008266 poly(U) RNA binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0048864 stem cell development
Cellular Component
GO:0005737 cytoplasm
GO:0005844 polysome
Orthologs
Species
Homo sapiens
Gene ID
Gene Order
ENSG00000153944
View Gene Order
Pathways
NETPATH
REACTOME
KEGG
mmu03015
mRNA surveillance pathway pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa03015
mRNA surveillance pathway pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.418462 Mm.443787 Mm.474737
RefSeq NM_001201341 NM_054043 XM_006534440 XM_006534442 XM_006536469 XM_006536473
OMIM
CCDS CCDS48882 CCDS56796
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca