Mus musculus Gene: Snx5
Summary
InnateDB Gene IDBG-208427.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Snx5
Gene Name sorting nexin 5
Synonyms 0910001N05Rik; 1810032P22Rik; AU019504; D2Ertd52e;
Species Mus musculus
Ensembl Gene ENSMUSG00000027423
Encoded Proteins
sorting nexin 5
sorting nexin 5
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000089006:
This gene encodes a member of the sorting nexin family. Members of this family contain a phox (PX) domain, which is a phosphoinositide binding domain, and are involved in intracellular trafficking. This protein binds to fanconi anemia complementation group A protein, but its function is unknown. This gene results in two transcript variants encoding the same protein. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 2:144250123-144270906
Strand Reverse strand
Band G1
Transcripts
ENSMUST00000028909 ENSMUSP00000028909
ENSMUST00000110030 ENSMUSP00000105657
ENSMUST00000138745
ENSMUST00000125285
ENSMUST00000156936
ENSMUST00000124389
ENSMUST00000153033
ENSMUST00000155509
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 18 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 18 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0035091 phosphatidylinositol binding
Biological Process
GO:0006886 intracellular protein transport
GO:0006907 pinocytosis
Cellular Component
GO:0001726 ruffle
GO:0001891 phagocytic cup
GO:0005768 endosome
GO:0030659 cytoplasmic vesicle membrane
GO:0031234 extrinsic component of cytoplasmic side of plasma membrane
GO:0031313 extrinsic component of endosome membrane
GO:0031901 early endosome membrane
GO:0070685 macropinocytic cup
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
Method
Confidence
Comments
Non-SSD Ortholog
Possible paralog/unusual divergence/ gene prediction error
Not yet available
Non-SSD Ortholog
Possible paralog/unusual divergence/ gene prediction error
Pathways
NETPATH
REACTOME
Membrane Trafficking pathway
Golgi Associated Vesicle Biogenesis pathway
trans-Golgi Network Vesicle Budding pathway
Clathrin derived vesicle budding pathway
KEGG
INOH
PID BIOCARTA
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
EGFR1 pathway
REACTOME
trans-Golgi Network Vesicle Budding pathway
Clathrin derived vesicle budding pathway
Golgi Associated Vesicle Biogenesis pathway
Membrane Trafficking pathway
Golgi Associated Vesicle Biogenesis pathway
Clathrin derived vesicle budding pathway
trans-Golgi Network Vesicle Budding pathway
Membrane Trafficking pathway
KEGG
INOH
PID BIOCARTA
PID NCI
Cross-References
SwissProt Q9D8U8
TrEMBL Q3TXT4
UniProt Splice Variant
Entrez Gene 69178
UniGene Mm.444953
RefSeq NM_024225 NM_001199188
OMIM
CCDS CCDS16815
HPRD
IMGT
MGI ID MGI:1916428
MGI Symbol Snx5
EMBL AK007676 AK029463 AK031873 AK049129 AK159115 AK159904 AK169786 BC002242
GenPept AAH02242 BAB25180 BAC26460 BAC27587 BAC33558 BAE34831 BAE35468 BAE41365
RNA Seq Atlas 69178