Version 5.4
Mus musculus Gene: Zkscan5
Summary
InnateDB Gene IDBG-208624.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Zkscan5
Gene Name zinc finger with KRAB and SCAN domains 5
Synonyms AI132486; AI326970; hKraba1; Zfp95
Species Mus musculus
Ensembl Gene ENSMUSG00000055991
Encoded Proteins
IDBP-208626
zinc finger with KRAB and SCAN domains 5
IDBP-208628
zinc finger with KRAB and SCAN domains 5
IDBP-541551
zinc finger with KRAB and SCAN domains 5
IDBP-538624
zinc finger with KRAB and SCAN domains 5
IDBP-538803
zinc finger with KRAB and SCAN domains 5
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000196652:
This gene encodes a zinc finger protein of the Kruppel family. The protein contains a SCAN box and a KRAB A domain. A similar protein in mouse is differentially expressed in spermatogenesis. Two alternatively spliced transcript variants differing only in the 5' UTR have been described. Additional variants have been found, but their full-length sequences have not been determined. [provided by RefSeq, Jul 2008]
This gene encodes a zinc finger protein of the Kruppel family. The protein contains a SCAN box and a KRAB A domain. A similar protein in mouse is differentially expressed in spermatogenesis. Two alternatively spliced transcript variants differing only in the 5\' UTR have been described. Additional variants have been found, but their full-length sequences have not been determined. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 5:145204562-145221750
Strand Forward strand
Band G2
Transcripts
ENSMUST00000085671 ENSMUSP00000082814
ENSMUST00000031601 ENSMUSP00000031601
ENSMUST00000161896 ENSMUSP00000124838
ENSMUST00000162168 ENSMUSP00000124171
ENSMUST00000161881 ENSMUSP00000124544
ENSMUST00000160162
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 5 interaction(s) predicted by orthology.
Predicted by orthology
Total 5 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0005515 protein binding
GO:0046872 metal ion binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
Cellular Component
GO:0005622 intracellular
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Gene ID
Gene Order
ENSG00000196652
View Gene Order
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_12627
Generic Transcription Pathway pathway
REACT_71
Gene Expression pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.332842
RefSeq NM_001167944 NM_016683 XM_006504820 XM_006504821 XM_006504822
OMIM
CCDS CCDS39386 CCDS51697
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca