InnateDB: Systems Biology of the Innate Immune Response

Homo sapiens Gene: SIN3A

Summary

InnateDB Gene

IDBG-23397.7

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

SIN3A

Gene Name

SIN3 transcription regulator homolog A (yeast)

Synonyms

Species

Homo sapiens

Ensembl Gene

ENSG00000169375

Encoded Proteins

IDBP-23399

SIN3 homolog A, transcription regulator (yeast)

IDBP-240537

SIN3 homolog A, transcription regulator (yeast)

IDBP-240539

SIN3 homolog A, transcription regulator (yeast)

IDBP-747294

IDBP-746798

IDBP-747734

IDBP-746699

IDBP-746459

IDBP-746312

IDBP-745987

IDBP-747649

Protein Structure

Useful resources

Stemformatics EHFPI ImmGen

Entrez Gene

Summary

The protein encoded by this gene is a transcriptional regulatory protein. It contains paired amphipathic helix (PAH) domains, which are important for protein-protein interactions and may mediate repression by the Mad-Max complex. [provided by RefSeq, Jul 2008]

Gene Information

Type

Protein coding

Genomic Location

Chromosome 15:75369379-75455842

Strand

Reverse strand

Band

q24.2

Transcripts

ENST00000360439	ENSP00000353622
ENST00000394949	ENSP00000378403
ENST00000394947	ENSP00000378402
ENST00000570115	ENSP00000455662
ENST00000564778	ENSP00000455204
ENST00000568190	ENSP00000456997
ENST00000568919
ENST00000566640
ENST00000567289	ENSP00000455834
ENST00000568431	ENSP00000454750
ENST00000562776	ENSP00000455072
ENST00000568309	ENSP00000455644
ENST00000565264	ENSP00000454296
ENST00000570124
ENST00000570021

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 262 experimentally validated interaction(s) in this database.
They are also associated with 42 interaction(s) predicted by orthology.

Experimentally validated
Total	262 [view]
Protein-Protein	260 [view]
Protein-DNA	1 [view]
Protein-RNA	0
DNA-DNA	1 [view]
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	42 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0000976	transcription regulatory region sequence-specific DNA binding
GO:0001102	RNA polymerase II activating transcription factor binding
GO:0001103	RNA polymerase II repressing transcription factor binding
GO:0001106	RNA polymerase II transcription corepressor activity
GO:0003677	DNA binding
GO:0003682	chromatin binding
GO:0003700	sequence-specific DNA binding transcription factor activity
GO:0003714	transcription corepressor activity
GO:0005515	protein binding
GO:0008134	transcription factor binding
GO:0032403	protein complex binding
GO:0033558	protein deacetylase activity

Biological Process

GO:0000122	negative regulation of transcription from RNA polymerase II promoter
GO:0001701	in utero embryonic development
GO:0002218	activation of innate immune response
GO:0002230	positive regulation of defense response to virus by host
GO:0002244	hematopoietic progenitor cell differentiation
GO:0006260	DNA replication
GO:0006351	transcription, DNA-templated
GO:0006355	regulation of transcription, DNA-templated
GO:0006476	protein deacetylation
GO:0007568	aging
GO:0007596	blood coagulation
GO:0010243	response to organonitrogen compound
GO:0010971	positive regulation of G2/M transition of mitotic cell cycle
GO:0031937	positive regulation of chromatin silencing
GO:0034613	cellular protein localization
GO:0042754	negative regulation of circadian rhythm
GO:0043066	negative regulation of apoptotic process
GO:0043619	regulation of transcription from RNA polymerase II promoter in response to oxidative stress
GO:0044255	cellular lipid metabolic process
GO:0044281	small molecule metabolic process
GO:0045892	negative regulation of transcription, DNA-templated
GO:0045944	positive regulation of transcription from RNA polymerase II promoter
GO:0048511	rhythmic process
GO:0051595	response to methylglyoxal
GO:0071333	cellular response to glucose stimulus
GO:1900181	negative regulation of protein localization to nucleus
GO:1901675	negative regulation of histone H3-K27 acetylation
GO:2000678	negative regulation of transcription regulatory region DNA binding

Cellular Component

GO:0000776	kinetochore
GO:0000785	chromatin
GO:0005634	nucleus
GO:0005654	nucleoplasm
GO:0005667	transcription factor complex
GO:0005737	cytoplasm
GO:0016580	Sin3 complex
GO:0017053	transcriptional repressor complex
GO:0043234	protein complex
GO:0045171	intercellular bridge