Version 5.4
Homo sapiens Gene: SOHLH2
Summary
InnateDB Gene IDBG-24353.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SOHLH2
Gene Name spermatogenesis and oogenesis specific basic helix-loop-helix 2
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000120669
Encoded Proteins
IDBP-24325
spermatogenesis and oogenesis specific basic helix-loop-helix 2
IDBP-24327
spermatogenesis and oogenesis specific basic helix-loop-helix 2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This locus represents naturally occurring read-through transcription between the neighboring C13orf38 (chromosome 13 open reading frame 38) and SOHLH2 (spermatogenesis and oogenesis specific basic helix-loop-helix 2) genes. The read-through transcript encodes a fusion protein that shares sequence identity with the products of each individual gene. [provided by RefSeq, Nov 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 13:36168208-36214615
Strand Reverse strand
Band q13.3
Transcripts
ENST00000379881 ENSP00000369210
ENST00000317764 ENSP00000326838
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0046983 protein dimerization activity
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0007275 multicellular organismal development
GO:0007283 spermatogenesis
GO:0048477 oogenesis
Cellular Component
GO:0005634 nucleus
Orthologs
No orthologs found for this gene
Cross-References
SwissProt Q9NX45
TrEMBL
UniProt Splice Variant
Entrez Gene 54937
UniGene Hs.124519
RefSeq NM_001282147 NM_017826
HUGO HGNC:26026
OMIM
CCDS CCDS61309 CCDS9355
HPRD
IMGT
EMBL AK000456 AK301863 AL139377 AL160392 AY884305 BC025383 CH471075
GenPept AAH25383 AAW78547 BAA91175 BAG63302 CAC42466 EAX08554 EAX08555
RNA Seq Atlas 100526761 54937

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca