Version 5.4
Homo sapiens Gene: PAGR1
Summary
InnateDB Gene IDBG-24804.7
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PAGR1
Gene Name PAXIP1 associated glutamate-rich protein 1
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000185928
Encoded Proteins
IDBP-24806
chromosome 16 open reading frame 53
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary C16ORF53 (PA1) is a component of a Set1-like multiprotein histone methyltransferase complex (Cho et al., 2007 [PubMed 17500065]).[supplied by OMIM, May 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 16:29815964-29830627
Strand Forward strand
Band p11.2
Transcripts
ENST00000320330 ENSP00000326519
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 19 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 19 [view]
Protein-Protein 19 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
Cellular Component
GO:0005634 nucleus
GO:0035097 histone methyltransferase complex
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000030680
View Gene Order
ENSBTAG00000010904
Not yet available
Cross-References
SwissProt Q9BTK6
TrEMBL
UniProt Splice Variant
Entrez Gene 79447
UniGene
RefSeq NM_024516
HUGO HGNC:28707
OMIM 612033
CCDS CCDS10655
HPRD
IMGT
EMBL AC009133 AC120114 BC003640 CH471238 EF195235
GenPept AAH03640 ABM69249 EAW79989
RNA Seq Atlas 79447

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca