Mus musculus Gene: Rpl39
Summary
InnateDB Gene IDBG-250096.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rpl39
Gene Name ribosomal protein L39
Synonyms 2810465O16Rik;
Species Mus musculus
Ensembl Gene ENSMUSG00000079641
Encoded Proteins
ribosomal protein L39
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome X:37082520-37085402
Strand Reverse strand
Band A3.3
Transcripts
ENSMUST00000115231 ENSMUSP00000110886
ENSMUST00000138799
ENSMUST00000131149
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005622 intracellular
GO:0005840 ribosome
Orthologs
No orthologs found for this gene
Pathways
NETPATH
REACTOME
Peptide chain elongation pathway
Translation pathway
Eukaryotic Translation Termination pathway
Nonsense-Mediated Decay (NMD) pathway
Metabolism of proteins pathway
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) pathway
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) pathway
Cap-dependent Translation Initiation pathway
Eukaryotic Translation Initiation pathway
SRP-dependent cotranslational protein targeting to membrane pathway
Eukaryotic Translation Elongation pathway
Formation of a pool of free 40S subunits pathway
Gene Expression pathway
L13a-mediated translational silencing of Ceruloplasmin expression pathway
GTP hydrolysis and joining of the 60S ribosomal subunit pathway
KEGG
Ribosome pathway
INOH
PID BIOCARTA
PID NCI
Cross-References
SwissProt P62892
TrEMBL Q505A8
UniProt Splice Variant
Entrez Gene 67248
UniGene Mm.440956
RefSeq NM_026055 XM_006525246 XM_006529004 XM_006543396 XM_006544616
OMIM
CCDS CCDS40927
HPRD
IMGT
MGI ID MGI:1914498
MGI Symbol Rpl39
EMBL AK002591 AK005511 AK007821 AK008853 AK013381 AK028139 AK088761 AK146772 AK150955 AK168773 BC039092 BC094645 BC139247 BC139249 CH466550
GenPept AAH39092 AAH94645 AAI39248 AAI39250 BAB22212 BAB24090 BAB25284 BAB25930 BAB28820 BAC25767 BAC40552 BAE27421 BAE29987 BAE40609 EDL03959
RNA Seq Atlas 102634812 102635960 102642263 67248