Version 5.4
Mus musculus Gene: Sssca1
Summary
InnateDB Gene IDBG-253522.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Sssca1
Gene Name Sjogren's syndrome/scleroderma autoantigen 1 homolog (human)
Synonyms 1500016H19Rik; C184L
Species Mus musculus
Ensembl Gene ENSMUSG00000079478
Encoded Proteins
IDBP-132980
Sjogren's syndrome/scleroderma autoantigen 1 homolog (human)
IDBP-536582
Sjogren's syndrome/scleroderma autoantigen 1 homolog (human)
IDBP-540535
Sjogren's syndrome/scleroderma autoantigen 1 homolog (human)
IDBP-536713
Sjogren's syndrome/scleroderma autoantigen 1 homolog (human)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000173465:
This antigen is recognized by a subset of anti-centromere antibodies from patients with scleroderma and/or Sjogren's syndrome. Subcellular localization has not yet been established. [provided by RefSeq, Jul 2008]
This antigen is recognized by a subset of anti-centromere antibodies from patients with scleroderma and/or Sjogren\'s syndrome. Subcellular localization has not yet been established. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 19:5728088-5731732
Strand Reverse strand
Band A
Transcripts
ENSMUST00000025885 ENSMUSP00000025885
ENSMUST00000160852 ENSMUSP00000125570
ENSMUST00000159693 ENSMUSP00000123867
ENSMUST00000160141
ENSMUST00000162976 ENSMUSP00000125679
ENSMUST00000159008
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 4 experimentally validated interaction(s) in this database.
They are also associated with 82 interaction(s) predicted by orthology.
Experimentally validated
Total 4 [view]
Protein-Protein 4 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 82 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0042802 identical protein binding
Biological Process
GO:0008150 biological_process
Cellular Component
GO:0005575 cellular_component
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000173465
View Gene Order
ENSBTAG00000003713
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq NM_020491
OMIM
CCDS CCDS29479
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca