Version 5.4
Homo sapiens Gene: LHFP
Summary
InnateDB Gene IDBG-26231.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol LHFP
Gene Name lipoma HMGIC fusion partner
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000183722
Encoded Proteins
IDBP-26233
lipoma HMGIC fusion partner
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene is a member of the lipoma HMGIC fusion partner (LHFP) gene family, which is a subset of the superfamily of tetraspan transmembrane protein encoding genes. This gene is fused to a high-mobility group gene in a translocation-associated lipoma. Mutations in another LHFP-like gene result in deafness in humans and mice. Alternatively spliced transcript variants have been found; however, their full-length nature is not known. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 13:39342892-39603528
Strand Reverse strand
Band q14.11
Transcripts
ENST00000379589 ENSP00000368908
ENST00000495922
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
Biological Process
Cellular Component
GO:0016021 integral component of membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
Method
Confidence
Comments
ENSMUSG00000048332
View Gene Order
Ortholuge
SSD Ortholog
Ortholog supports species divergence
ENSBTAG00000034033
Not yet available
Ortholuge
SSD Ortholog
Ortholog supports species divergence
Cross-References
SwissProt Q9Y693
TrEMBL A0A024RDR1
UniProt Splice Variant
Entrez Gene 10186
UniGene Hs.507798 Hs.619126
RefSeq NM_005780
HUGO HGNC:6586
OMIM 606710
CCDS CCDS9369
HPRD 09464
IMGT
EMBL AF098807 AK223369 AK313036 AL136358 AL138685 AL158194 BC017824 CH471075
GenPept AAD31386 AAH17824 BAD97089 BAG35869 CAC39629 CAH71055 CAH73751 EAX08616 EAX08617
RNA Seq Atlas 10186

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca